Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0716 ATGGAGCTTGCAACTGTAAAAACTGAATTCTGCCCAAGAAGCTATAGGATGCTCATGATGGAAGGCGGAAATATTGACATGAAGTGCACGAAAAGGCGGCGAAGAGACTCGTCAGTGGCACTTTTAGAGGGCAATGAGAAGCAAGGGCAAGCAAAGCAGGGTGGTCAATCGACTACTACAACTACTGTCAAGAGAAGTTCCAGGTTTCGCGGAGTTAGCAGACATAGATGGACTGGGAGATATGAAGCTCATTTATGGGACAAAGGGACTTGGAATCCGACTCAAAAGAAGAAAGGGAAGCAAGGAGCTTATGCTGATGAAGAAGCTGCTGCTAGAGCATACGATTTGGCTGCACTTAAGTACTGGGGAACTTCTACCTTCACAAATTTCCCTGTATCCAATTATGAGAACGAGATTGACATAATGAAAACTATGACAAAAGAAGAATATCTTGCTTCTTTAAGAAGAAGAAGCAGTGGATTTTCCAGAGGAGTATCAAAGTACAGAGGAGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGGATAGGGAGAGTGTTTGGAAACAAGTACCTCTACCTTGGCACATACAGTACACAAGAAGAGGCTGCTCGTGCATATGATATAGCAGCTATAGAATACAGAGGATTGAATGCAGTAACAAACTTTGACTTGAGCACATATATTAGATGGCTAAGACCAGAAGCCCTTAATACTACTTGTCAGGAACAACAACACAACCCAGCATTTCAAAATCTCCTGACCAACCCTAACTTCACCCAAACTAGAGAAATCACTGAGGTACCTAATGTCAATCACAATCCAAAGGAGCAAGATATACTTCAGTACTACTCAACCCCTTTTAGTCATAGAAGTAATGCCAAGTCATCGTCTTCTCCGACAGCATTAGGGCTTCTGCTGAAGTCCTCAGTGTTCAGAGAGCTAATGCAGAAAAATATGAATCAGGGAATAGGTGAAGAAGAAGGAAGTGATGGATTTGCCTACTTGTACTCTTATAATGACAATAGAATACCAAATTTACGGTTACCAGAAGAGAAAGCATTGCCAGCACAGTATCATAGAAATGATGAGCAATCTATATGGAATGGGTGCTTTTAA 1122 0.4189 MELATVKTEFCPRSYRMLMMEGGNIDMKCTKRRRRDSSVALLEGNEKQGQAKQGGQSTTTTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYADEEAAARAYDLAALKYWGTSTFTNFPVSNYENEIDIMKTMTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGLNAVTNFDLSTYIRWLRPEALNTTCQEQQHNPAFQNLLTNPNFTQTREITEVPNVNHNPKEQDILQYYSTPFSHRSNAKSSSSPTALGLLLKSSVFRELMQKNMNQGIGEEEGSDGFAYLYSYNDNRIPNLRLPEEKALPAQYHRNDEQSIWNGCF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0716 373 PRINTS Ethylene responsive element binding protein signature 207 227 IPR001471 GO:0003700|GO:0006355
Mibi12g0716 373 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Mibi12g0716 373 SUPERFAMILY DNA-binding domain 67 133 IPR016177 GO:0003677
Mibi12g0716 373 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Mibi12g0716 373 SMART rav1_2 68 137 IPR001471 GO:0003700|GO:0006355
Mibi12g0716 373 CDD AP2 166 227 IPR001471 GO:0003700|GO:0006355
Mibi12g0716 373 ProSiteProfiles AP2/ERF domain profile. 68 131 IPR001471 GO:0003700|GO:0006355
Mibi12g0716 373 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 49 290 - -
Mibi12g0716 373 MobiDBLite consensus disorder prediction 49 67 - -
Mibi12g0716 373 MobiDBLite consensus disorder prediction 41 69 - -
Mibi12g0716 373 FunFam AP2-like ethylene-responsive transcription factor 166 227 - -
Mibi12g0716 373 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
Mibi12g0716 373 Gene3D AP2/ERF domain 67 133 IPR036955 GO:0003700|GO:0006355
Mibi12g0716 373 Pfam AP2 domain 166 217 IPR001471 GO:0003700|GO:0006355
Mibi12g0716 373 Pfam AP2 domain 67 123 IPR001471 GO:0003700|GO:0006355
Mibi12g0716 373 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Mibi12g0716 373 SUPERFAMILY DNA-binding domain 166 227 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0716 Mibi-ChrMibi12 18837328 18841601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0716 64 334 AP2-EREBP Transcription Factor Family AT5G57390 48.355 1.91e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi12g0716 AP2 1.1e-07 CL0081