Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0702 ATGGGAAAAGATCCTGGGAAATGGATAAAGACCTTGTTTTCAGGGAAGAAATCATCAAAGTCTAATCGATCAAGCAAAAGAAATGCGTTGAAACCTTCAAGTAACCAGGATGCGTTGGCCACTATTGAGGCATCTCTGTCTTATATTCCTGATTCTTCATTGATATCCCCACCCACATCTGGAGCTGATCCCCATAAAGAAGTGCTCTTGGAAAAGGTAGTTGTTGGGAGATCATCAAATGACAGCAATATTCTTTCAGCTGGGGTTGAAGACAACAATGCAGAAATTGTTAATTCTGGTTCATCGGATAATGTTGAGGAAAGCAGGCTTGCTGAAGCTGCTATAAAAGTTCAGGCTGGTTTTAGGGGATATCAGGCCCGTCAGGCATTTCAAACACTAAAAGGAGCCATAAAACTGCAAGCTCTTATTCGAGGCCACTTGGTTAGGAGGCAAGCTGTTTCTACATTTTACTGTGTGAAGGGAATTGTAAAAGTTCAAGCGCATGTTCGCGGTCATATGGTTCGACATTCTGATATTGGAGTTGCTGTTCTCAAGATTTTCAAGGATACTACATACTCAAATTCTGCTGAAGTAGTTACAACTACACAAGCAGAGAAGCTGCCAACCAGTGTTTTTATTAACAAGCTTCTGGCCTCGTCATCCTCAACAGTTCCCTTGCATCTTAATTTTGATCCTGGAGAATCTAACTTCACTTGGAAGTGGCTTGAGCGTTGGACCAAGTCAAACTTTTGGGAACCTCTTTCCAAACCAGGGAAGAAACATGACTTAAAGTCCAATAAGAATAGTGCCAATTGTCAAACGTTTGAACATAACAAGGGGAAACCGAAAAGAAATGTCAAGAAAGCTTCTGGTTTAAAAGTCGATGATGGCTCAACCAATGAGTCAAACACAGTTAAACAGCCTACAAAAAAGGTTTCAAGCCACCCGATGCAATCACAGGAACATCCACAAAAGGAAACAAAAAACCTTATTAAGAAAACTTCAACACAGAGTGTTTCTAGTACATCTGAGGTTGTCCATGAGAAAAGGAAACACATCACTGGAAAACTTCTGGGTGATGCTGTTACTGATGTTTCAAAGCATAGTGCAAGTGTTTCAGCAGACAAAATAAAAAGTTTGGAAGTGTCAAAATCAAAGCAGTCTGATCTTGAAAAGAGCCTTGGGTCACAAGCAAAAGATGAGAATGGCCACTTACACAAAAATCCTATCTCCGATTCGCAGACTAGTGTAAAGAATGGTAAAGTTATTCAAGGAGATATTGAAGACTTGAAAATTAATGTGAACCCTCAGAACTCCCTAAGAAGAGCTTCACTCCCTGCCAGTTTCAATGATCAAGCTAATAATAGTTCTCATACCACTCCAAAAGTTCCTAGCTATATGGTCCCCACTGAATCTGCAAAAGCTAAGCTAAGAGCACAAGGCTCTCCAAGGTTTTCTGGTGACTTGGTGGATAAAATTGGTGTAACCAGGCGTCATTCACTTACAACTTCATTAAATGGCAGGTTTAGCTTATTTTCCCCACTAACTTCAAGCAGCAGAGGAGTTATCAGAACTGATAGATCTCTGTCATCATTAAGGGATGGAACTGACAAGTTCATCCAACCCCAGTGGAGAAGGTGA 1641 0.4071 MGKDPGKWIKTLFSGKKSSKSNRSSKRNALKPSSNQDALATIEASLSYIPDSSLISPPTSGADPHKEVLLEKVVVGRSSNDSNILSAGVEDNNAEIVNSGSSDNVEESRLAEAAIKVQAGFRGYQARQAFQTLKGAIKLQALIRGHLVRRQAVSTFYCVKGIVKVQAHVRGHMVRHSDIGVAVLKIFKDTTYSNSAEVVTTTQAEKLPTSVFINKLLASSSSTVPLHLNFDPGESNFTWKWLERWTKSNFWEPLSKPGKKHDLKSNKNSANCQTFEHNKGKPKRNVKKASGLKVDDGSTNESNTVKQPTKKVSSHPMQSQEHPQKETKNLIKKTSTQSVSSTSEVVHEKRKHITGKLLGDAVTDVSKHSASVSADKIKSLEVSKSKQSDLEKSLGSQAKDENGHLHKNPISDSQTSVKNGKVIQGDIEDLKINVNPQNSLRRASLPASFNDQANNSSHTTPKVPSYMVPTESAKAKLRAQGSPRFSGDLVDKIGVTRRHSLTTSLNGRFSLFSPLTSSSRGVIRTDRSLSSLRDGTDKFIQPQWRR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0702 546 SMART iq_5 157 179 IPR000048 GO:0005515
Mibi12g0702 546 SMART iq_5 132 153 IPR000048 GO:0005515
Mibi12g0702 546 SMART iq_5 109 131 IPR000048 GO:0005515
Mibi12g0702 546 MobiDBLite consensus disorder prediction 254 350 - -
Mibi12g0702 546 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Mibi12g0702 546 Pfam Protein of unknown function (DUF4005) 452 507 IPR025064 -
Mibi12g0702 546 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Mibi12g0702 546 MobiDBLite consensus disorder prediction 381 418 - -
Mibi12g0702 546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 175 IPR027417 -
Mibi12g0702 546 MobiDBLite consensus disorder prediction 14 36 - -
Mibi12g0702 546 Pfam IQ calmodulin-binding motif 134 151 IPR000048 GO:0005515
Mibi12g0702 546 Pfam IQ calmodulin-binding motif 112 131 IPR000048 GO:0005515
Mibi12g0702 546 Pfam IQ calmodulin-binding motif 160 175 IPR000048 GO:0005515
Mibi12g0702 546 Gene3D - 108 156 - -
Mibi12g0702 546 MobiDBLite consensus disorder prediction 295 320 - -
Mibi12g0702 546 MobiDBLite consensus disorder prediction 381 407 - -
Mibi12g0702 546 PANTHER IQ-DOMAIN 5-RELATED 1 504 - -
Mibi12g0702 546 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0702 Mibi-ChrMibi12 18597671 18602287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0702 1 546 IQD Protein Family AT1G14380 33.725 2.92e-76 250