Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0682 ATGATTCATGGATCTGTTTGTCGATTGAAAAAATCGTCGGCCCCTTTTGGATCTCTCCGCTCTCTCCCTCAATTGGTTTGGAAGCTCAAAGCCTCAAAGCCAAAATTTCCACGCAGCTTGAGGTGCAGAGTTAAAGGGAAGGCAAGAACAACGATGGATTTGGACCAGTGGATCGTGAAGGTGAAGGAAGGGCAGCATCTTCTCGAAGACGAACTTCAACTTCTTTGCGAATATGTAAAAGAAATCCTCATTGAGGAGTCCAATGTGCAGCCTGTGAATAGCCCAGTAACTGTTTGTGGTGATATTCACGGTCAATTTCATGATCTGATGAAACTTTTCCAGACTGGGGGTCATGTACCTGAGACTAATTATATCTTTATGGGAGACTTTGTCGATAGAGGATACAATAGTCTGGAAGTTTTTACCATCCTTTTACTTCTTAAAGCTAGATACCCTGCTAATATTACCCTTCTACGAGGAAACCATGAAAGTAGGCAGCTAACCCAGGTCTATGGATTTTATGATGAATGCCAAAGGAAATATGGAAATGCTAATGCTTGGCGGTATTGTACAGATGTTTTTGACTACCTTACGCTTTCAGCAATAATAGATGGAACTGTGCTCTGTGTTCATGGCGGTCTTTCTCCTGACATTCGAACAATTGATCAGATAAGGGTTATTGATCGAAATTGTGAAATTCCACATGAGGGACCCTTTTGTGATCTAATGTGGAGTGATCCTGAAGATATTGAGACATGGGCAGTCAGCCCCCGTGGTGCAGGTTGGCTTTTTGGATCTAGGGTCACGTCTGAGTTCAATCACATAAATACTCTTGATCTTGTTTGTCGAGCCCATCAACTAGTGCAAGAAGGCCTTAAGTATATGTTTCAAGATAAAGGCCTTGTAACTGTATGGTCTGCGCCTAATTATTGTTACCGATGTGGAAATGTTGCTTCTATTTTGAGCTTCAATGAAAATATGGAGAGAGAAGTTAAATTTTTCACTGAAACTGAGGAGAACAACCAGATGAGGGGGCCCAGGACAGGCGTTCCATATTTCTTGTAA 1065 0.4197 MIHGSVCRLKKSSAPFGSLRSLPQLVWKLKASKPKFPRSLRCRVKGKARTTMDLDQWIVKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIDRNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINTLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0682 354 SMART pp2a_7 67 338 IPR006186 GO:0016787
Mibi12g0682 354 Gene3D - 45 354 IPR029052 -
Mibi12g0682 354 FunFam Serine/threonine-protein phosphatase 52 354 - -
Mibi12g0682 354 SUPERFAMILY Metallo-dependent phosphatases 50 337 IPR029052 -
Mibi12g0682 354 ProSitePatterns Serine/threonine specific protein phosphatases signature. 158 163 IPR006186 GO:0016787
Mibi12g0682 354 PRINTS Serine/threonine phosphatase family signature 157 181 IPR006186 GO:0016787
Mibi12g0682 354 PRINTS Serine/threonine phosphatase family signature 124 151 IPR006186 GO:0016787
Mibi12g0682 354 PRINTS Serine/threonine phosphatase family signature 95 122 IPR006186 GO:0016787
Mibi12g0682 354 PRINTS Serine/threonine phosphatase family signature 192 218 IPR006186 GO:0016787
Mibi12g0682 354 PRINTS Serine/threonine phosphatase family signature 221 248 IPR006186 GO:0016787
Mibi12g0682 354 PRINTS Serine/threonine phosphatase family signature 300 316 IPR006186 GO:0016787
Mibi12g0682 354 PRINTS Serine/threonine phosphatase family signature 277 297 IPR006186 GO:0016787
Mibi12g0682 354 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 52 354 - -
Mibi12g0682 354 CDD MPP_PP2A_PP4_PP6 53 336 - -
Mibi12g0682 354 Pfam Calcineurin-like phosphoesterase 95 286 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0682 Mibi-ChrMibi12 17903936 17912838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0682 94 272 Calmodulin-binding Proteins AT5G63870 37.500 6.59e-29 112