Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0674 ATGATTTGCTTTTGGGCTTTTCACTCTCGATTGTGGATGGCCACCATTGTGTTTTACACATGCTTATGGATCCCACTGCTCCAACTAAAGAGAACTCTCTTGAGTCTTTTGTTTAATTGTAACGACAAAAGTAGACTAGCTTTGCGAGGAGATCGGCCTGAAGTTCCGGCACTTCCGGCTACAATGTATGAGGATTTGCAGAGACATTATTGTTCTCCCTTAGATGGAAGCATTTTGGAGGAGGCGATTTGCTCAATTTGCTTGTTGGAGTTTGAGGGTGAAGACATAGTGAGCAAATTGCCTAGATGTGGGCATGTGTACCATGTTAACTGCATTGAGGGATGGATGCTCAGGAATTACTTTACCTGCCCACTCTGTAGATCTTTCGTATTTTCATAA 399 0.4286 MICFWAFHSRLWMATIVFYTCLWIPLLQLKRTLLSLLFNCNDKSRLALRGDRPEVPALPATMYEDLQRHYCSPLDGSILEEAICSICLLEFEGEDIVSKLPRCGHVYHVNCIEGWMLRNYFTCPLCRSFVFS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0674 132 Pfam Ring finger domain 84 127 IPR001841 -
Mibi12g0674 132 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 130 IPR013083 -
Mibi12g0674 132 SUPERFAMILY RING/U-box 75 130 - -
Mibi12g0674 132 ProSiteProfiles Zinc finger RING-type profile. 84 127 IPR001841 -
Mibi12g0674 132 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 54 129 IPR045899 -
Mibi12g0674 132 SMART ring_2 84 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0674 Mibi-ChrMibi12 17679195 17679593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0674 9 132 C3H Transcription Factor Family AT4G38140 41.935 2.47e-25 92.0