Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0672 ATGGCTTTCTTCCCTGCAAATTTCATGCTTCAAACCTCTCACCCAGAAGATCATCATCATCAACCTCCTTCTCTCAACTCGCTCCTAACTTCATGTGCTCCACAAGATTATCATCATCATGGAGGTCCTTCTTTTCTAGGTAAGAGATGCATGTCATTTTCAGGAATTGAACTCGGAGAAGAAGCAAATAATGCTGAGGAAGATTTGTCTGATGATGGATCTCAGGCGGGGGAGAAGAAGAGGAGGCTAAACATGGAACAAGTTAAGGCACTGGAGAAGAGCTTTGAGCTTGGGAATAAACTTGAACCAGAGAGAAAGATGCAGCTAGCAAGGGCTCTAGGATTGCAGCCAAGACAGATTGCGATATGGTTCCAGAACAGAAGAGCAAGGTGGAAGACAAAGCAACTTGAGAAAGACTATGATGTTCTTAAAAGACAATATGATTCTCTTAAGGCAGATAATGATGCTCTTCAAGCTCACAATCAAAAACTCCAAGCTGAGATATTTGCATTGAAGAACAGAGAGCCAACTGAGTCAATAAACCTCAATAAAGAAACAGAGGGATCTTCCAGCAACAGAAGTGAGAATAGTTCTGAGATTAAGTTTGATATAACAAGAACACCAGCTATAGATGATAGTCCTGATCTATCTACACACCAAACTAGCATAACCTTATTTCCATCTTCTTCTGCTTCTGTTGTTAGGCCTCCTTCTTCAGGAGGAGGAGGAGGGGTGGCCCACCAGCTCTTTCAAGTTTCTTCTTCAACAAGACCAGAGATTCATCAATGCCAGAAAATAGATCATCATCAGATGGTCAAAGAAGAGAATAATTTGAGCAATATGTTTTGTGGGATCGATGATCAATCAGGGTTCTGGCCATGGTTGGAGCACCAACATTTCAATTGA 906 0.4161 MAFFPANFMLQTSHPEDHHHQPPSLNSLLTSCAPQDYHHHGGPSFLGKRCMSFSGIELGEEANNAEEDLSDDGSQAGEKKRRLNMEQVKALEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYDSLKADNDALQAHNQKLQAEIFALKNREPTESINLNKETEGSSSNRSENSSEIKFDITRTPAIDDSPDLSTHQTSITLFPSSSASVVRPPSSGGGGGVAHQLFQVSSSTRPEIHQCQKIDHHQMVKEENNLSNMFCGIDDQSGFWPWLEHQHFN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0672 301 FunFam Homeobox-leucine zipper protein ATHB-13 71 138 - -
Mibi12g0672 301 SUPERFAMILY Homeodomain-like 72 136 IPR009057 -
Mibi12g0672 301 SMART HOX_1 77 138 IPR001356 GO:0003677
Mibi12g0672 301 MobiDBLite consensus disorder prediction 182 202 - -
Mibi12g0672 301 CDD homeodomain 79 135 IPR001356 GO:0003677
Mibi12g0672 301 Pfam Homeobox associated leucine zipper 134 174 IPR003106 GO:0006355|GO:0043565
Mibi12g0672 301 Pfam Homeodomain 79 132 IPR001356 GO:0003677
Mibi12g0672 301 ProSiteProfiles 'Homeobox' domain profile. 74 134 IPR001356 GO:0003677
Mibi12g0672 301 MobiDBLite consensus disorder prediction 179 202 - -
Mibi12g0672 301 MobiDBLite consensus disorder prediction 61 80 - -
Mibi12g0672 301 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 65 216 IPR045224 GO:0003700
Mibi12g0672 301 PRINTS Lambda-repressor HTH signature 105 114 IPR000047 GO:0003677
Mibi12g0672 301 PRINTS Lambda-repressor HTH signature 114 130 IPR000047 GO:0003677
Mibi12g0672 301 Gene3D - 71 140 - -
Mibi12g0672 301 ProSitePatterns 'Homeobox' domain signature. 109 132 IPR017970 GO:0000981|GO:0006355
Mibi12g0672 301 Coils Coil 126 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0672 Mibi-ChrMibi12 17537055 17538564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0672 1 301 Homeobox Transcription Factor Family AT1G69780 62.460 2.03e-120 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi12g0672 Homeodomain 1.4e-15 CL0123