Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0671 ATGTGCAACTTTTGGATCAAGGGTTGCATTTATTTAATGTGTGTTTCTGCAATTTCTGGGGCTTCATCCCAAGAACCCAAACTCGGATCTACCCGTGTTGTATTTCAGACGAATTATGGGGATATTGAATTTGGTTTCTTTCCCAGAGTTGCACCCAAAACCGTTGATCACATTTTTAAACTTGTGCGGCTTGGATGCTATAATACAAATCATTTTTTCCGGGTAGATAAGGGCTTTGTGGCCCAAGTAGCGGATGTTATGGGTGGAAGATCAGCTCCAATGAATGAACAACAAAAAAGAGAGGCTGAGAAGAATGTTGTTGGTGAATTTAGCCAAGTCAAACATGTTAGAGGCATTCTTTCTATGGGAAGGCATAGTGATCCAGATAGTGGTGGATCCTCATTTTCAATGCTTCTTGGGGATGCTCCTCATCTTGACGGCCAGTATGCAATATTCGGAAGAATCACTAGAGGTGATGATACCTTGAGAAAGCTCGAGGAACTACCTACTCGTAGAGAGGGGATATTTGTTATGCCAACAGAGCGTATTACTATTTTGTCATCCTATTACTACGACACTGAGAGTGAAGATTGCGAACGAGACAGATCGATTATGAAACACAGACTTGCTGCTTCAGCTTTTGAAATCGAAAGACAGAGGATGAAATGCTTTCCCTGA 678 0.4174 MCNFWIKGCIYLMCVSAISGASSQEPKLGSTRVVFQTNYGDIEFGFFPRVAPKTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVMGGRSAPMNEQQKREAEKNVVGEFSQVKHVRGILSMGRHSDPDSGGSSFSMLLGDAPHLDGQYAIFGRITRGDDTLRKLEELPTRREGIFVMPTERITILSSYYYDTESEDCERDRSIMKHRLAASAFEIERQRMKCFP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0671 225 CDD cyclophilin 34 187 - -
Mibi12g0671 225 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 187 IPR002130 GO:0000413|GO:0003755
Mibi12g0671 225 Gene3D - 19 199 IPR029000 -
Mibi12g0671 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 IPR002130 GO:0000413|GO:0003755
Mibi12g0671 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 72 84 IPR002130 GO:0000413|GO:0003755
Mibi12g0671 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 61 IPR002130 GO:0000413|GO:0003755
Mibi12g0671 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 IPR002130 GO:0000413|GO:0003755
Mibi12g0671 225 SUPERFAMILY Cyclophilin-like 32 196 IPR029000 -
Mibi12g0671 225 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 5 225 IPR044233 -
Mibi12g0671 225 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 34 190 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0671 Mibi-ChrMibi12 17516019 17520579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0671 33 191 U-box Gene Family AT5G67530 29.193 1.30e-11 61.6