Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0669 ATGTCATCCAGAAGATCATCCTCCTCCCGTTCCAGACAATCCGGTTCTTCCTCTGATATCACTGAAGCTCAGATCAATGACCTTGTGTCCAAGTTACAACAACTCATCCCTGAGCTTCGTGCTCCACGTCGTTCCGACAAGGTTTCTGCCTCAAGGGTGTTACAGGAGACTTGTAACTACATCAAGAGCTTGCACAGAGAAGTTGATGATTTGAGTGAAAGATTGTCTGAGCTATTGGCCAACACTGACTCAAACAGTGCCCAAGCCGCCATTATTAGGAGCCTTCTTATGTAA 294 0.4626 MSSRRSSSSRSRQSGSSSDITEAQINDLVSKLQQLIPELRAPRRSDKVSASRVLQETCNYIKSLHREVDDLSERLSELLANTDSNSAQAAIIRSLLM 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0669 97 FunFam Transcription factor ILI6 10 93 - -
Mibi12g0669 97 CDD bHLH_AtPRE_like 20 81 - -
Mibi12g0669 97 PANTHER TRANSCRIPTION FACTOR PRE 1 97 IPR044293 GO:0006355|GO:0040008|GO:0046983
Mibi12g0669 97 Pfam Helix-loop-helix DNA-binding domain 24 65 IPR011598 GO:0046983
Mibi12g0669 97 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 64 IPR011598 GO:0046983
Mibi12g0669 97 MobiDBLite consensus disorder prediction 1 22 - -
Mibi12g0669 97 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 86 IPR036638 GO:0046983
Mibi12g0669 97 Coils Coil 61 81 - -
Mibi12g0669 97 Gene3D - 22 93 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0669 Mibi-ChrMibi12 17354165 17355001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0669 20 96 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 79.221 1.12e-37 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g0669 HLH 5.4e-07 No_clan