Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0665 ATGGAGGGTCCTCCATCTAACGATCTTTGTTCGGTGTGCCATGGAGAATTCAACAAACCTTGCCAAGCCAATTGCTCTCACTGGTTTTGCGGAAATTGTATTATGCAAGTGTGGCACCATGGATCAACTGTCAGACCATGTAGATGCCCATTATGTCGCCGTGAAATTACATTGCTGGTTCCAACTGAGAACTTGTTAAGGCAGCGATATGACCCTGAAGTTGCTGAGGTTCTACGGAATATTGAAGCTTATAATCGTTTGTTTGGTGGCCAGGCAACTAGTCTTGTTCAGAGAATGCAAGATCTTCCTTTTCTCTTGCGAAGGCTACTGCGGGAGCTGATGGATCCTCACAGAACACTTCCTCTTGCCATTAAGGCTCGTTTCTATATTGCAGCGATAACAAGTGCTGTTTACATTATAAGCCCCGTTGACATTATTCCAGAAGCGATATTAGGAATATTTGGTTTATTGGATGATCTCCTTGTTGCGCTCATCTGCTTCCTCTATGTTGCTTCTGTTTATAGATCGGTGCTCTATTTCCGCTATGGGGGCTCTCGAGTCTGA 564 0.445 MEGPPSNDLCSVCHGEFNKPCQANCSHWFCGNCIMQVWHHGSTVRPCRCPLCRREITLLVPTENLLRQRYDPEVAEVLRNIEAYNRLFGGQATSLVQRMQDLPFLLRRLLRELMDPHRTLPLAIKARFYIAAITSAVYIISPVDIIPEAILGIFGLLDDLLVALICFLYVASVYRSVLYFRYGGSRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0665 187 Pfam Protein of unknown function (DUF1232) 131 164 IPR010652 -
Mibi12g0665 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 100 IPR013083 -
Mibi12g0665 187 SMART ring_2 10 52 IPR001841 -
Mibi12g0665 187 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Mibi12g0665 187 PANTHER UNCHARACTERIZED 2 179 IPR038896 GO:0061630
Mibi12g0665 187 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Mibi12g0665 187 SUPERFAMILY RING/U-box 6 62 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0665 35 185 C3H Transcription Factor Family AT1G72175 73.510 1.53e-67 201