Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0655 ATGATGTTTTTCCACGGTGAAATGGTTTTCCCTCTTTTTGTGTTCATCATGATATTCTGCCAATGTTTCAGGTTTAGCATCGCAGGAAATTGTGGAGGGAAGGCAATCGTACATACAATTACTGTTGCCCGATCTGGTCAATTCAAAACAGTTCAATCAGCAATTGATTCAATAAAGAGCAACAACGCTCAGTGGGTGAAAATTCACATAGATCCAGGCAAATACATTGAGAAGGTGCAGATTCCAAGAGATAAACCATGTATCTTTTTGGAAGGTGAGGGCAGAGGAGTTACCACAATCACATACAATGACCACCAACAAACAGATACAAGCGCAACATTCTCTTCCTTTCCGAACAATATAGTTGCAGCTGGAATCAGCTTCGAGAACACGCTTGATCTCTCCGATAAATCAGAATTAGACCAAATCGTAAGTGGAAAAGAGGTGATAGGACCAGCATTGGCAGCACGAATATACGGCGATAAATCTGCATTTTTCGATTGCGGCTTCTTGGGTTTTCAAGATACACTTTGGGATGTCCAAGGTCGTCATTACTATAAAAATTGCTACATTCAGGGTGCTGTAGACTTCATCTTTGGCAACGGTCAATCCTATTTTGAGAATTGCCACATGAACGCGATGTTGACCACATCAAAAGCTCAAGTTTCTTATGGTTATGTAACGGCACAAGGGCGAAGTTCAAAGAATGATCCTAGTGGTTTTGTATTTAGAGGCGGGAAAGTTGTGGGAAGTGGACCAGTTTTTCTGGGGAGAGCCTATGGGCCTTATTCAAGGGTTATATTTCATGGAACATTTCTTGATTCAGTGGTATCTCCTCAAGGATGGGATGCCTGGCATCACACACAAAATGTGGGTAATTTGATGTATGTAGAAGTTAATTGTACTGGCCAAGGGGCAAATCGGAACAAACGAGTGCATTGGGAGATGAACATCTCTCCTAATCAGATTAATCAATTTTCGAAGTCATCATTCATAAACCAAGATCAATGGCTTGCGAGTATACCTCACTAA 1032 0.4128 MMFFHGEMVFPLFVFIMIFCQCFRFSIAGNCGGKAIVHTITVARSGQFKTVQSAIDSIKSNNAQWVKIHIDPGKYIEKVQIPRDKPCIFLEGEGRGVTTITYNDHQQTDTSATFSSFPNNIVAAGISFENTLDLSDKSELDQIVSGKEVIGPALAARIYGDKSAFFDCGFLGFQDTLWDVQGRHYYKNCYIQGAVDFIFGNGQSYFENCHMNAMLTTSKAQVSYGYVTAQGRSSKNDPSGFVFRGGKVVGSGPVFLGRAYGPYSRVIFHGTFLDSVVSPQGWDAWHHTQNVGNLMYVEVNCTGQGANRNKRVHWEMNISPNQINQFSKSSFINQDQWLASIPH 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0655 343 SUPERFAMILY Pectin lyase-like 39 339 IPR011050 -
Mibi12g0655 343 FunFam Pectinesterase 34 342 - -
Mibi12g0655 343 Pfam Pectinesterase 43 334 IPR000070 GO:0030599|GO:0042545
Mibi12g0655 343 ProSitePatterns Pectinesterase signature 2. 191 200 IPR033131 -
Mibi12g0655 343 Gene3D - 34 342 IPR012334 -
Mibi12g0655 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0655 Mibi-ChrMibi12 16760790 16763932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0655 48 286 Carbohydrate Esterase AT2G19150 48.954 1.85e-73 227