Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi12g0636 | ATGGATCAGCAAAACATGCAAAACCAAAGCATGCATTTGGTTCTTTCCTCTGATGCCAAGCCAAGGCTTAAATGGACTCCTGAGCTTCATCAACGATTCCTTGATGCTGTTAACCAGCTTGGAGGGGCTGAAAGGGCAACCCCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGACTTACCTTGTACCACCTGAAGAGCCATTTACAGAAATTCAGACTTGGAAAAAGCCCTCAACCAGAAGCTTTGGACGATGATGATAAACAAGAAGGTTATAAAGAAGACCAAAGCAGTGATGGTCATTGCATTATGGAAACCACTGTGGGGACCCAGAATCAGATGACTGAAAGCCAGCAGATCGCTCAAGCTCTCCAACTACAAATGGAAGTGCAAAGGAAGCTTTACGAACAAATTGAGGTGCAGAAACATTTGCAGCTTCGGATCGAAGCTCAAGGGAAGTACTTACAATCAGTGCTATTAAAAGCTCAGGAAGCACTTGCAGGGTACAACCCTTCAGCTGCTGGTATAGAATATGCAAAAGCTGAGCTCTCTCAATTGGTCTCAATAATCAACAATGGTTGTCCAAGTTCTCCCATCTCTGATCTGACAGAATCCGGAGTTCTGAACTTGAAAGATGGAGGAGAAATGAGGAAGCAAAGCAGAGGGACTATGTGCTCATTGGAGAGTTCCTTGACATCTTCTGAGAGCACAGGGACAAAGGAGGAGGAGGAGGAGCAAGAGGAGCCTCACAAGTCTAATAAAAGAACTACAGTTGAACTGAAATTAATGACTGTTCACCCAGAAGATGATGAAGAATTGGATGGTGATTCAAAGAATCGAGCTAGTGGGAGAAAAAGGAGTGGAACGACTAATTCTGATGGTTTCTGTGTAGAACAACCAGTCAGTAAAAGATGCAGCAACTGGTTCAGGAAATCTGAGTCTTCTGAATTGCTTGATTTGAACAGCCAGTATCACAGTGACACTGACTCAGACTCAAAGACAATAATAGACTTGAATAGAAGTTCAACGCACAGTTTTAGCTAA | 1044 | 0.4349 | MDQQNMQNQSMHLVLSSDAKPRLKWTPELHQRFLDAVNQLGGAERATPKSLMRVMGIPGLTLYHLKSHLQKFRLGKSPQPEALDDDDKQEGYKEDQSSDGHCIMETTVGTQNQMTESQQIAQALQLQMEVQRKLYEQIEVQKHLQLRIEAQGKYLQSVLLKAQEALAGYNPSAAGIEYAKAELSQLVSIINNGCPSSPISDLTESGVLNLKDGGEMRKQSRGTMCSLESSLTSSESTGTKEEEEEQEEPHKSNKRTTVELKLMTVHPEDDEELDGDSKNRASGRKRSGTTNSDGFCVEQPVSKRCSNWFRKSESSELLDLNSQYHSDTDSDSKTIIDLNRSSTHSFS | 347 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi12g0636 | 347 | MobiDBLite | consensus disorder prediction | 237 | 283 | - | - | |
| Mibi12g0636 | 347 | Pfam | Myb-like DNA-binding domain | 22 | 71 | IPR001005 | - | |
| Mibi12g0636 | 347 | MobiDBLite | consensus disorder prediction | 323 | 347 | - | - | |
| Mibi12g0636 | 347 | MobiDBLite | consensus disorder prediction | 215 | 297 | - | - | |
| Mibi12g0636 | 347 | MobiDBLite | consensus disorder prediction | 78 | 100 | - | - | |
| Mibi12g0636 | 347 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 20 | 75 | IPR006447 | GO:0003677 | |
| Mibi12g0636 | 347 | Pfam | MYB-CC type transfactor, LHEQLE motif | 119 | 164 | IPR025756 | - | |
| Mibi12g0636 | 347 | Coils | Coil | 121 | 141 | - | - | |
| Mibi12g0636 | 347 | SUPERFAMILY | Homeodomain-like | 19 | 75 | IPR009057 | - | |
| Mibi12g0636 | 347 | Gene3D | - | 19 | 77 | - | - | |
| Mibi12g0636 | 347 | MobiDBLite | consensus disorder prediction | 74 | 102 | - | - | |
| Mibi12g0636 | 347 | FunFam | Myb family transcription factor | 19 | 77 | - | - | |
| Mibi12g0636 | 347 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 4 | 262 | IPR044848 | GO:0003700 | |
| Mibi12g0636 | 347 | MobiDBLite | consensus disorder prediction | 222 | 236 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi12g0636 | Mibi-ChrMibi12 | 16180326 | 16181852 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi12g0636 | 11 | 304 | G2-like Transcription Factor Family | AT1G69580 | 48.387 | 3.27e-76 | 236 |
Transcription factors information