Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0634 ATGTCGTTATTATCTGAAGTTAAGGACCCCTCCATCATCAAGCTCTTTGGGACGATGATTTCTATACCACTTCAATGTTCTGTTTCCGCCACTCACTCTGCTATGGATCAGGAATCGTCAAAGGTGGAACTCTTCACCCCAGAGCAAGATGATGGTGCTTCACCTCAAACCACAGAGGACTTGAAATCTAACATATCTTCAGGAGTTTGTGAGAGCCCTAAGATCCTATCGCCTTCAGCTGAAAAAGAGGATTCTGTACTGAAATCATCTAAATCTGGAGAACAAAGTGAGACAAGCACACAGCAAGAAAAATCTCCCAAAAAGCCTGACAAGATAATTCCATGCCCTCGATGCAATAGCATGGAGACCAAATTCTGTTATTTTAACAACTACAACGTCAATCAACCTCGTCACTTCTGTAAGAATTGCCAGAGATATTGGACTGCTGGAGGAACCATGAGAAATGTGCCTGTTGGTGCCGGTCGCCGCAAGAACAAGAGCTCTTGCGCTTCTCAATACCGACACATAGTGATTCCTGAGTCACTTATAACAGCAGCCACTGCAAATGGATTACACAACACTGTCTTGAGAAATGGAGCTGGGGTATTGACATTTGGCTCAGATTCTGCTATAGGTGATTCCATGACTTCTGTTTTGAACCTCGCAGGTAAAACTCATAATAATGTTTCAAATGGAGTTCATGTAGCCAAGAAGAATATTACTGTTTCTTATGGCAGAGAAGATGATGGTGGGAATCATTCAGTTGGAGCTTGTGTTACAACTTCAACTTCATCAGAGAAGAAAGCCAATTCTTGTTCCCAAGAATCTATGAATAAAACCCATGAAGGTTTCCCTCCTCAATTACAATGCATTCCAAGTTCTCCATGGCAATATCCATGGAATTCTCTTGTGCCTCCTCATGCATTATCGTCAGGTTATCCAGTGACCTTTTATCCCACACCTGCTTATTGGGGTTGTGCATTGCCAGCCTCTTTGAACATAGCATGTGTTTCTCCACAATCTTCTGTGAACAATCCTTCCCCTAAGTCAGCCTCTGATTCCCCTGCCTCAAGGAAGCGCTCGAGGGACGGAAGCATCATCACTCAGGCCAACTCTCAGAAAGAAAAGCCTGGTACAGAGAATAAGGGCTCAAAAAATGGTGTCTCGATCCCCAAGACACTAAGAATTGATGATCCCACTGAGGCTGCAAAAAGTTCTATATTGTCAACACTAGGGATCAGGAATGGAAAGACTAATTCCTTAAATAGATGTTTAGGCCTATTCAAGGCAATTCCATCTAAGGAAAATGACCAGAATCATCATCACATGGTTGAGGCTCTGTCTGTGCTACAAGCAAACCCGGCAGCCTTATCACGGTCAGCTGCTTTCCAAGAGCAGCAGGCTTAG 1407 0.4357 MSLLSEVKDPSIIKLFGTMISIPLQCSVSATHSAMDQESSKVELFTPEQDDGASPQTTEDLKSNISSGVCESPKILSPSAEKEDSVLKSSKSGEQSETSTQQEKSPKKPDKIIPCPRCNSMETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSCASQYRHIVIPESLITAATANGLHNTVLRNGAGVLTFGSDSAIGDSMTSVLNLAGKTHNNVSNGVHVAKKNITVSYGREDDGGNHSVGACVTTSTSSEKKANSCSQESMNKTHEGFPPQLQCIPSSPWQYPWNSLVPPHALSSGYPVTFYPTPAYWGCALPASLNIACVSPQSSVNNPSPKSASDSPASRKRSRDGSIITQANSQKEKPGTENKGSKNGVSIPKTLRIDDPTEAAKSSILSTLGIRNGKTNSLNRCLGLFKAIPSKENDQNHHHMVEALSVLQANPAALSRSAAFQEQQA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0634 468 MobiDBLite consensus disorder prediction 340 354 - -
Mibi12g0634 468 Pfam Dof domain, zinc finger 111 167 IPR003851 GO:0003677|GO:0006355
Mibi12g0634 468 MobiDBLite consensus disorder prediction 340 396 - -
Mibi12g0634 468 MobiDBLite consensus disorder prediction 361 388 - -
Mibi12g0634 468 PANTHER CYCLIC DOF FACTOR 2 6 466 IPR045174 GO:0003700|GO:0006355
Mibi12g0634 468 MobiDBLite consensus disorder prediction 267 286 - -
Mibi12g0634 468 ProSitePatterns Zinc finger Dof-type signature. 115 151 IPR003851 GO:0003677|GO:0006355
Mibi12g0634 468 ProSiteProfiles Zinc finger Dof-type profile. 113 167 IPR003851 GO:0003677|GO:0006355
Mibi12g0634 468 MobiDBLite consensus disorder prediction 50 73 - -
Mibi12g0634 468 MobiDBLite consensus disorder prediction 38 113 - -
Mibi12g0634 468 MobiDBLite consensus disorder prediction 267 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0634 Mibi-ChrMibi12 16095087 16097211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0634 3 466 C2C2-Dof Transcription Factor Family AT3G47500 39.959 7.66e-79 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi12g0634 zf-Dof 8.2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0634 12 16095087 16097211 Mibi09g0124 09 1691272 1692819 CCT