Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0623 ATGGAGGCTGGATCAACAAGAGGGTCTGGTCTTCCCCCAGGCTTCAGATTCCACCCAACCGACGAAGAACTAATCGTTCATTACCTCTGTAATCAAGCCACTTCCAAGCCTTGCCCTGCTTCTATCATCCCTGAAGTTGATATCTACAAGTTTGATCCATGGCAATTACCTGAGAAGGCAGTGTTTGGGGAGAATGAGTGGTATTTCTTTACGCCAAGGGAAAGGAAGTACCCAAATGGTGTTAGGCCAAACAGGGCCACTGTCTCTGGGTACTGGAAGGCCACTGGTACAGATAAGGCAATTTATAGTGGGGCTAAGAACGTTGGGGTGAAGAAAGCTTTGGTCTTTTACAAAGGAAGACCACCAAAAGGTGTGAAAACTGATTGGATCATGCATGAATATCGTCTCATTGGTTCTCCAAGGCGAGCCAACAAGCATATTGGATCCATGAGATTGGATGACTGGGTGCTGTGTAGGATTTACAAGAAGAGGAACGTGGCAAAATCAATGGACCTAAAGGAGGAAGTAATAATGGAGGAAGAACTATATTTAAATCCTGAAATGAATAATATATCAGAAGCAAATAATAAGATCAATCTTGTCTCTGAGCAGCAGCAGCAGCAAATGGTGAAATTCCCAAGGACTTGTTCTCTCACTCATCTTCTGGAAATGGATTCTTACTTGGCTCCAATCTCACACCTCTTATCTGATGCTTCGTATAACTCAACCTTTGATTATCAGATCAATACTGCTCATAATAATGCTGGAAATATAATAGACCCATTTGTAAAGCCTCAGGTATTTGAGGTCCCAGATCAGTACTATGCCACATCATCATCAACCAGCCAGTATTTGTGA 858 0.4277 MEAGSTRGSGLPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWQLPEKAVFGENEWYFFTPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGAKNVGVKKALVFYKGRPPKGVKTDWIMHEYRLIGSPRRANKHIGSMRLDDWVLCRIYKKRNVAKSMDLKEEVIMEEELYLNPEMNNISEANNKINLVSEQQQQQMVKFPRTCSLTHLLEMDSYLAPISHLLSDASYNSTFDYQINTAHNNAGNIIDPFVKPQVFEVPDQYYATSSSTSQYL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0623 285 PANTHER NAC TRANSCRIPTION FACTOR 56 11 202 - -
Mibi12g0623 285 Pfam No apical meristem (NAM) protein 12 136 IPR003441 GO:0003677|GO:0006355
Mibi12g0623 285 SUPERFAMILY NAC domain 6 163 IPR036093 GO:0003677|GO:0006355
Mibi12g0623 285 FunFam NAC transcription factor 20 167 - -
Mibi12g0623 285 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Mibi12g0623 285 ProSiteProfiles NAC domain profile. 11 163 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0623 Mibi-ChrMibi12 15810770 15812117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0623 6 234 NAC Transcription Factor Family AT1G69490 68.670 2.88e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi12g0623 NAM 5.4e-39 No_clan