Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0619 ATGATCGTGGAAGAGACAAAGCCACAGCTAGCGATGGCCGAAGAAGGGTATATGCAGCAGCTTAGATCTAAAGCAACAGAGCTTCTCTTAAGAGAAGAATGGAAGGAATCCGTCGAAGCATATTCAAACTTCATCACTCTCTGCCAAAACCAACTCTTCCATTTCCCAAACCATTCAGATTCAGATCAGCTTCAAAGGCTGAGAAAATCCCTCTGTTTGGCCCTCTCAAACAGAGCCGAAGCAAGATCAAGATTGAAAGATTTTCATTCTGCGTTGGAAGATTGCGATTCAGCTTTGGAAATCGATGGCACCCATTTGAAGACTCTGATCTGCAAAGGTAAGATTTTGCTCAACCTCAATATGTATTCCATGGCTTTGGATTGCTTTAGAGTCGCTCTTCTTAATCCTCAGGCTAATGGGAACTCTGAAAACTTAAATGGGTATGTCGAGAAATGTAAAAAACTCGACTTTCTCTCCAGAACTGGATCTCTGGACCTTTCTGATTGGGTTTCAAGTGGGTTTCGAGGGAAGTCTCCAGAACTTGCAGAGTACGTTGGTTCTGTGGAGATCATGAAATCTGAGATCAGTGGACGTGGGTTGTTTGCAACTAAGAACATCGATGCAGGGGGATTGGTTTTGGTTACAAAGGCAATAGCAATTGAAAGGAGTGTATTGGGGGGAAAGGATCTGAGTGAGGAAGCTCAATTAGTGATGTGGAAGAATTTCATTGATAAAGTTACAGACTTTGTTGGAAAATGTCACAGAACAAGCAAGTTGATCGGCAAGTTGTCAAGTGGGGAAGATGAAGATTCGCTTGAGGTTCCTGATATAGCTATATTTAAACCAGGAGCAGAGGTGAAGAACAAGAACAAGAACAATCAAGCCAGTGATAGTGAGAAGATTGATATGGGTAAGTTACTAGCCATATTGGATGTGAATTCTCTAACTGAAGATTCAGTTTCAGCCAATGTATTAGGGAAGAAGAACAATGATTATTATGGTGTTGGGCTATGGCTATTACCTTCTTTCATCAACCATTCATGCTGCCCCAATGCAAGGAGATTACATGTAGGAGACTATCTGATAGTTCATGCTTCTAAAGATATCAAAGCAGGTGAAGAAATTAGCTTTGCCTATTTGGATACGCTTTCTTCATTGCACAAGCGTAAAGAGATGTCAATGACATGGGGAATCCAATGTAGATGTAAGAGATGCAAGTTTGAGTCAGAGATGATGTGCAAACAAGAGATGAGAGAGATTGAGATTGGTCTTGAAAGAGGGATGGATGTGGGAAGTGCAGTGTATAAATTAGAAGAAGATATGAAGAGATGGAAAGTGAGAGGGAAAGAGAAAGCATATTTGAGAGCATCATTTTGGTCTGCGTATTCTGAGGTTTACAGGTCTGATAGATTCAAGAAGAGGTGGGGAAGGCGGATTCCTGCCATGGATGCCGTAGTTTATAGCATCATTGATGTTATAGGAGGAGATGAGAGGCTTCTGAAGATTCAAATGGAGGAGATGAAGAAAAATGGAGGTGGTGGACTTGTGGAGATGGAGAAAGCTTTGAAGCTGGCAAGAGAAGTGTATGGGAAGGTGGTTAAAAAGCAGGCCATGAGGACTCTTCTTGAGCTATGCGTTGCAACTAATGAATGA 1653 0.4174 MIVEETKPQLAMAEEGYMQQLRSKATELLLREEWKESVEAYSNFITLCQNQLFHFPNHSDSDQLQRLRKSLCLALSNRAEARSRLKDFHSALEDCDSALEIDGTHLKTLICKGKILLNLNMYSMALDCFRVALLNPQANGNSENLNGYVEKCKKLDFLSRTGSLDLSDWVSSGFRGKSPELAEYVGSVEIMKSEISGRGLFATKNIDAGGLVLVTKAIAIERSVLGGKDLSEEAQLVMWKNFIDKVTDFVGKCHRTSKLIGKLSSGEDEDSLEVPDIAIFKPGAEVKNKNKNNQASDSEKIDMGKLLAILDVNSLTEDSVSANVLGKKNNDYYGVGLWLLPSFINHSCCPNARRLHVGDYLIVHASKDIKAGEEISFAYLDTLSSLHKRKEMSMTWGIQCRCKRCKFESEMMCKQEMREIEIGLERGMDVGSAVYKLEEDMKRWKVRGKEKAYLRASFWSAYSEVYRSDRFKKRWGRRIPAMDAVVYSIIDVIGGDERLLKIQMEEMKKNGGGGLVEMEKALKLAREVYGKVVKKQAMRTLLELCVATNE 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0619 550 CDD SET_SMYD 307 405 - -
Mibi12g0619 550 SMART set_7 186 386 IPR001214 GO:0005515
Mibi12g0619 550 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 15 544 - -
Mibi12g0619 550 Gene3D SET domain 284 436 IPR046341 -
Mibi12g0619 550 SMART tpr_5 72 105 IPR019734 GO:0005515
Mibi12g0619 550 SMART tpr_5 18 51 IPR019734 GO:0005515
Mibi12g0619 550 SMART tpr_5 106 139 IPR019734 GO:0005515
Mibi12g0619 550 Gene3D Tetratricopeptide repeat domain 14 156 IPR011990 GO:0005515
Mibi12g0619 550 SUPERFAMILY SET domain 187 406 IPR046341 -
Mibi12g0619 550 SUPERFAMILY TPR-like 19 135 IPR011990 GO:0005515
Mibi12g0619 550 Pfam SET domain 197 379 IPR001214 GO:0005515
Mibi12g0619 550 ProSiteProfiles SET domain profile. 186 380 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi12g0619 SET 1.2e-13 No_clan