Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0605 ATGGGTAGGTCACCTTGCTGTGAGAAAGTGGGGTTGAAGAAAGGGCCATGGACTCCTGAAGAAGACCAGAAGCTTGTCGCTTACATTGAACAACATGGCCATGGAAGCTGGCGTGCTTTGCCTTCTAAAGCTGGACTTGAGAGATGTGGGAAAAGTTGCAGACTTAGATGGACTAATTATCTCAGACCTGATATTAAACGGGGAAAGTTCAGCTTGCAAGAAGAGAGAACCATTATTCAACTTCATGCTCTTCTTGGAAATAGGTGGTCAGCCATTGCCGCTCACTTGCCCAAGAGAACTGACAATGAGATCAAGAACTACTGGAACACTCACCTCAAGAAAAGGCTCTCCAAAATGGGAATCGACCCGGCCACTCACCGGCCTAAAGCCGACACTATCGGCGTCGGGCCAGCAAGCTCAAGCCTCAGCCACATGGCTCAGTGGGAGAGTGCCCGGCTCGAAGCCGAAGCCAGGCTGGTCAGGGAGTCCAAGCTCCAGCTCGGCTCACCATCATCATCCACTCAACCGGCTCGGCTTGTCCTCAACAGAATCTCCCCTCGCCCCTCCGTACCTCCCTGCCTAGATGTCCTCAAAGCATGGCAGAACTCATGGACGACGACGTCGTCGTTTCATACTACACAAGACAAAAATACCACAATGCATAACATGTACGCCTTGATGCTTTCCGCTGCAGAAGACGACCTTGAGTCGCCTACGTCCACCTTATGTTTCCCAGAACCCATGCTGCCACGTGTCACTGCCACAACTACCGTGGGAATTTTACCTAGTGAGAAAGTGGCCCCAACTCCAATGGTTAATTTAGTGGCGGCACCCACTTCGGGGATCGAGCCATGGGGCATGATGGAGATTGTGGGAGAAAGTGGAAAGGCAACAAATTTTTTGCAAGACGACGACATTATGGTGGCAGTGGAGGCATTTATGGGAGAAAGGTACAAGAATGTGCAGGTTAATTTGCAAGAAGTACTCGAGTCGAACGGTAAAATGAAAGGTTTAAGCAGCGAAGATAACGATGATATGCTTGTTTTTGAATCCAATGAGAACATGGACGAGTTGGGATTTGTGGAAATTGATGGGGAAGCAAGCATGATTAGTGGAAACACAAACTTTGAGGAGAAAAATCATTACTGGAACAGCATTTGTAGTGCTCAAACTTGGTGA 1179 0.4885 MGRSPCCEKVGLKKGPWTPEEDQKLVAYIEQHGHGSWRALPSKAGLERCGKSCRLRWTNYLRPDIKRGKFSLQEERTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLSKMGIDPATHRPKADTIGVGPASSSLSHMAQWESARLEAEARLVRESKLQLGSPSSSTQPARLVLNRISPRPSVPPCLDVLKAWQNSWTTTSSFHTTQDKNTTMHNMYALMLSAAEDDLESPTSTLCFPEPMLPRVTATTTVGILPSEKVAPTPMVNLVAAPTSGIEPWGMMEIVGESGKATNFLQDDDIMVAVEAFMGERYKNVQVNLQEVLESNGKMKGLSSEDNDDMLVFESNENMDELGFVEIDGEASMISGNTNFEEKNHYWNSICSAQTW 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0605 392 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 220 - -
Mibi12g0605 392 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi12g0605 392 FunFam MYB-related transcription factor 13 66 - -
Mibi12g0605 392 SMART sant 66 114 IPR001005 -
Mibi12g0605 392 SMART sant 13 63 IPR001005 -
Mibi12g0605 392 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi12g0605 392 FunFam MYB transcription factor 69 116 - -
Mibi12g0605 392 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi12g0605 392 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi12g0605 392 Gene3D - 13 66 - -
Mibi12g0605 392 Gene3D - 69 116 - -
Mibi12g0605 392 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi12g0605 392 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi12g0605 392 CDD SANT 16 61 IPR001005 -
Mibi12g0605 392 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi12g0605 392 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0605 Mibi-ChrMibi12 15033121 15035270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0605 1 176 MYB Transcription Factor Family AT5G15310 78.689 2.46e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi12g0605 Myb_DNA-binding 3.1e-15 CL0123