Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0600 ATGGCGAAATTTTATCCACAACTCGGCAAGAAATATCAACAGTTTCGCGCCACTCAGACACTAGAGCTGAAGCAAAAGCCACCAAAAACATCAATGGCTTCTTCTTCTTCTTCTTCCATTTTCTTTGCACTTCAAGGCTCTGCTTTTCTTTCTCCATCTACATCCCACAAAATCAACTCCCTCACCTTTCCAATCCCACCCAAAGCCCCACTTGTTCACACCAGAAAATCCCTCTCCGCCAAATCTCTTGCTTCTGCCGAAATCGACACATCATTGTCGCCGGCGATTCAGAAATTCTGGCAGTGGTTATGGGAAGAAGGTGTGATCTCTTCGAAGACGCCAGTGGAGCCAGGTGTAGTGCCGGAAGGCCTGGGGCTTGTTGCAAGGAGAGACATTTCGAGAAACGAGGTGGTTTTGCAGGTGCCCAAGAGATTGTGGATAAACCCTGATGCGGTTGCAGCTTCGGAGATTGGGAACGTGTGTAGCGGATTGAAGCCTTGGGTGTCGGTTGCTCTGTTCTTGATTAGAGAAAGGTCGAGGGATGAGTCTGTTTGGAAGCATTACTTCAAAATTCTCCCTGAGATCACTGATTCCACGATATATTGGTCAGAGGAGGAGCTCTCTGAACTTCAAGGCACTCAGCTTCTGAATACAACACTAGCCGTGAAAGAATATGTGCAGAATGAGTTTCTAAAACTGGAAGAAGAAATCATAGTCCCTAATAAGAAGCTTTTCCCTTCTGCGATCACAGTGGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGGGCTTTCTCCCGCCTTCGCAATGAAAACTTAGTGGTGATTCCACTTGCAGATTTGATAAACCATAGTGTCAGAGTCACAACAGAAGATCATGCTTATGAAATTAAAGGGGCAGCTGGTCTTTTCTCATGGGATTACCTGTTTTCTCTAAGGAGCCCTCTTTCTGTCAAGGCCGGGGAGCAGATATTTATTCAATATGATTTGAAGAAAAGCAATGCAGAGTTGGCTCTGGACTACGGCTTCATTGAACCAAATTCAAACAGGAATGCGTATACCCTCACGCTGCAAATATCTGAATCGGACCCTTTTTATGATGACAAACTAGACATTGCTGAGTCCAATGGTTTTGGTGAGACTGCATATTTCGACATCTTCTTTGACCAACCACTTCCATTAGGACTGCTTCCATATCTGCGTCTGGTGGCACTCAGTGGCACTGATGCTTTCTTGCTGGAATCTATATTCAGAAACTCCATTTGGGGTCATCTTGAGTTGCCTGTAAGCCGTGACAATGAGGAGCTAATTTGTCGAGTTGTTCAAGATGCCTGCAAATCTGCCCTTGCTGGTTATCATACTACCATTGAGGAGGATGCCAAGTTAAAAGAAGAAAAGCTGGACTCAAGGCTGGCAATTGCAGTTGGAATAAGAGAAGGAGAAAAGAAGGTGCTGCAGCAGATTGAAGGGATCTTCAAGGAGAAAGAGTTGGAATTGGATCTGTTAGAATATTATCAAGAAAGAAGGCTCAAGGATCTTGGTCTTTGTGGAGAAAGTGGTGAGATCCTTGGGGATCTCAGCAAGTTCATGTAA 1596 0.448 MAKFYPQLGKKYQQFRATQTLELKQKPPKTSMASSSSSSIFFALQGSAFLSPSTSHKINSLTFPIPPKAPLVHTRKSLSAKSLASAEIDTSLSPAIQKFWQWLWEEGVISSKTPVEPGVVPEGLGLVARRDISRNEVVLQVPKRLWINPDAVAASEIGNVCSGLKPWVSVALFLIRERSRDESVWKHYFKILPEITDSTIYWSEEELSELQGTQLLNTTLAVKEYVQNEFLKLEEEIIVPNKKLFPSAITVDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSVRVTTEDHAYEIKGAAGLFSWDYLFSLRSPLSVKAGEQIFIQYDLKKSNAELALDYGFIEPNSNRNAYTLTLQISESDPFYDDKLDIAESNGFGETAYFDIFFDQPLPLGLLPYLRLVALSGTDAFLLESIFRNSIWGHLELPVSRDNEELICRVVQDACKSALAGYHTTIEEDAKLKEEKLDSRLAIAVGIREGEKKVLQQIEGIFKEKELELDLLEYYQERRLKDLGLCGESGEILGDLSKFM 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0600 531 ProSiteProfiles SET domain profile. 106 330 IPR001214 GO:0005515
Mibi12g0600 531 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 1 529 IPR011192 GO:0009507|GO:0030785
Mibi12g0600 531 Gene3D set domain protein methyltransferase, domain 1 92 345 - -
Mibi12g0600 531 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 92 344 - -
Mibi12g0600 531 SMART set_7 113 336 IPR001214 GO:0005515
Mibi12g0600 531 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 346 510 - -
Mibi12g0600 531 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 353 524 IPR036464 -
Mibi12g0600 531 CDD SET_RBCMT 115 345 IPR044431 GO:0016279|GO:0018022
Mibi12g0600 531 Pfam Rubisco LSMT substrate-binding 362 486 IPR015353 -
Mibi12g0600 531 SUPERFAMILY SET domain 92 352 IPR046341 -
Mibi12g0600 531 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 87 477 - -
Mibi12g0600 531 Pfam SET domain 123 329 IPR001214 GO:0005515
Mibi12g0600 531 PIRSF RMT_SET 38 530 IPR011192 GO:0009507|GO:0030785
Mibi12g0600 531 Gene3D - 346 510 IPR036464 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0600 93 285 NAC Transcription Factor Family AT3G56570 28.713 9.69e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi12g0600 SET 1.4e-10 No_clan