Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0592 ATGGAAGAGACAGACAAGCCCAATGTTAAAGACAAGTTCATAACAAAAAGAAGAAGCCCTCAACAATACTCGACTCAGTTTGGTTTTTGCTACCAGAATGAGTATCATAGGTATTACCCGGCTCTTCTTCCTCTACCTTCTCTTCTCACTCAAAACCAGACCCTCAAATCCAGAACCCATTCACACAAGTCACCATGCAAGCTCAATAATTCTTCCTTTGCTGCCTCATCTTGTAACCAAGTCTCAGTAGACTCAATTTCTCATGCTCCCAAGGAATCTCGTCAGCAAGTCAATGCGTCCCTTAAAAGAGATGATGGGAAGAAACTCATACCTGAAAGAAAGCCACAGCCACTAGTTGCAGCAAGGAGACCAGACTCCGGAGGCAAAGAGGGCTCTGCCATATCTCTCCTTGCCAACCATTTTCTAGTCAAGTTTGATTCATCACAAAAAATATACCATTACGATGTTGAAATCACTCCCAGTCCCTCCAAGCAAGTAGCCCGGATAATCAAAGAGAAGTTTGTTAATAACAATTCTGATGTGCTTTTTGGTGCGCATCCAGCATATGATGGGCAGAAGAATCTTTACAGCTCTGTTGAATTTCAAAATGATAAGCTTGAGTTCTACGTAAGCCTTCCAATCCCTGCCAGCAAGAGCTCATCATCACTTGATAGAGAAATGTGTTACTTGAAAGAGAGGCATGAAAAGCTTAAACTGTTCAGGATAAATATAAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGAAAAATACTTGAGCAAAGAGGAAGATGATTGGATTCCACTTCCGCAGGATTATCTCCATGCTTTGGATGTGGTTCTGAGGGAGAGCCCAACTGAGAAGTGTATAGCTGCAGGTAGGTCTTTTTATTCAACTTCAATGGGAAGAGCCAAAGAGATTGGAGGAGGAGCTGCTGGGTTGAGAGGGTTCTTTCAGAGTCTAAGACCAACTCAACAAGGACTTGCTCTCAATGTTGACTTTTCTGTAACTGCTTTCCATGAAAGCATTGGAGTGATTACATACTTGCAGAAGCGCCTTGAGTTCCTTCGAGATCTTTCTCAAAGGAAGCCATTAAGTTTAACAAGTGAAGAGAGGAAAGAAGTGGAGAAGGCCTTGAAGAACATGAGGATCTTTGTTTGTCATAGAGAAACTGTTCAGAGATATCGTGTCTATGGCTTAACCGAGGAGGCCACTGAAAATCTTTGGTTTACTGATAGGGATGGAAAGAATCTGAGGCTAGTGAGCTATTTCAAAGATCATTATAATTATGACATACAATTCAGTAAATTGCCATGCTTGCAAGTAAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTATCATCTGTGAAGGCCAGAAATTCATGGGGAAGCTTTCTGATGATCAAACTGCAAAAATACTAAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATAAGGGGGCCTGTGGGGCCAACTAGTGGCAACCAGGAAAGAGAATTCAACCTCCAAGTGTCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTCCATCCTCCCAAGCTAAAGCTCGGAAATGGAGGTCATGTGACAAAGCTAGTTCCTTCACGGCATGATCGCCAGTGGAACCTTCTGGATGGTCATGTATTTGAGGGAACTAAAATTGAGAGGTGGGCATTAATAGGTTTTGGTGGCACACCTGAACAGAAGTCCAATGTCCCAACATTCATAAGCCAGCTTTCTCAAAGATGTGGAGAAATGGGCATTTTTCTCAACAAGAACACAATTATTAGCCCCTATTTTGAATCTGCTAAAGTTCTTAATAATGTCTCCCTTCTGGAATCCAAGCTTGAGAAAATCCAGAGAACTGCCTCAAACAATCTACAGCTGCTTATTTGTGTTATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGGGTTGTGAGCCAATGCTGCTTGTATCCAAATCTCAGCAAATTAAGTTCACAATTTTTGGCAAATTTGGCTCTCAAAATTAATGCCAAAGTTGGTGGATGCACTGTTGCGCTGTACAATTCACTTCCATCACAAATTCCACGGCTGTTTAAGTATGATGAACCAGTTATATTTATGGGTGCTGATGTAACACATCCTCATCCACTTGATGATCATAGTCCATCTGTCGCTGCTGTTGTTGGAAGCATGAACTGGCCTACTGCGAACAAATATATTTCAAGAATAAGGTCGCAAACACACCGACAAGAAATCATCGAGGATCTCGGTGCAATGGTCAAGGAGTTACTGGATGATTTCTATCAGGAGGTGAAGAAGCTCCCTGGGAGAATAATTTTCTTTAGAGATGGTGTCAGTGAAACCCAATTCTATAAAGTTCTTCAAGATGAACTACAATCCATCAAAGGGGCTTGTGATAGATTTCCTGGTTATGAACCATTCATTACTTTTGCAGTAGTACAGAAGAGGCACCACACAAGGTTGTTTCCCTTTGAAATTGATCAGTCATCCACAAAAAATCACAATCATAGTTATGAGAATATTCCACCAGGGACTGTGGTTGACTCTGTGATCACTCATCCAAAGGAGTTCGATTTCTATCTTTGCAGCCACTGGGGCATGAAAGGAACAAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTCCAGAAGCTGGTTCACAACCTATGCTATACTTTTGTTAGATGCACCAAGCCAATTTCTTTGGTTCCTCCTGTTTATTATGCACATTTAGCTGCATACAGAGGCAGACTCTACATTGATAGGTCAGATTGCTCCTCTGCTTTATCTAAAGGTACCTCTTCATTATCTAGAGCTGCACCTCCAAAGATAATACCTCTTCCAAAACTTAGTGAGAATATCAAGAAGCTCATGTTCTACTGCTAA 2970 0.4148 MEETDKPNVKDKFITKRRSPQQYSTQFGFCYQNEYHRYYPALLPLPSLLTQNQTLKSRTHSHKSPCKLNNSSFAASSCNQVSVDSISHAPKESRQQVNASLKRDDGKKLIPERKPQPLVAARRPDSGGKEGSAISLLANHFLVKFDSSQKIYHYDVEITPSPSKQVARIIKEKFVNNNSDVLFGAHPAYDGQKNLYSSVEFQNDKLEFYVSLPIPASKSSSSLDREMCYLKERHEKLKLFRINIKLVSKINGKELEKYLSKEEDDWIPLPQDYLHALDVVLRESPTEKCIAAGRSFYSTSMGRAKEIGGGAAGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVITYLQKRLEFLRDLSQRKPLSLTSEERKEVEKALKNMRIFVCHRETVQRYRVYGLTEEATENLWFTDRDGKNLRLVSYFKDHYNYDIQFSKLPCLQVSRSKPCYLPMELCIICEGQKFMGKLSDDQTAKILKMGCQRPRERKAIIEGVIRGPVGPTSGNQEREFNLQVSREMTRLSGRILHPPKLKLGNGGHVTKLVPSRHDRQWNLLDGHVFEGTKIERWALIGFGGTPEQKSNVPTFISQLSQRCGEMGIFLNKNTIISPYFESAKVLNNVSLLESKLEKIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFKYDEPVIFMGADVTHPHPLDDHSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIEDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYKVLQDELQSIKGACDRFPGYEPFITFAVVQKRHHTRLFPFEIDQSSTKNHNHSYENIPPGTVVDSVITHPKEFDFYLCSHWGMKGTSRPTHYHVLWDENQFTSDELQKLVHNLCYTFVRCTKPISLVPPVYYAHLAAYRGRLYIDRSDCSSALSKGTSSLSRAAPPKIIPLPKLSENIKKLMFYC 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0592 989 Pfam N-terminal domain of argonaute 133 281 IPR032474 -
Mibi12g0592 989 Pfam PAZ domain 353 475 IPR003100 GO:0005515
Mibi12g0592 989 ProSiteProfiles Piwi domain profile. 638 949 IPR003165 GO:0003676
Mibi12g0592 989 Pfam Argonaute linker 1 domain 292 340 IPR014811 -
Mibi12g0592 989 SUPERFAMILY Ribonuclease H-like 623 949 IPR012337 -
Mibi12g0592 989 SUPERFAMILY PAZ domain 337 494 IPR036085 GO:0005515
Mibi12g0592 989 Gene3D - 524 700 - -
Mibi12g0592 989 ProSiteProfiles PAZ domain profile. 350 459 IPR003100 GO:0005515
Mibi12g0592 989 CDD Piwi_ago-like 507 948 IPR045246 -
Mibi12g0592 989 Pfam Piwi domain 639 946 IPR003165 GO:0003676
Mibi12g0592 989 FunFam Argonaute 10 524 700 - -
Mibi12g0592 989 SMART Piwi_a_2 638 949 IPR003165 GO:0003676
Mibi12g0592 989 MobiDBLite consensus disorder prediction 97 112 - -
Mibi12g0592 989 Gene3D - 710 989 IPR036397 GO:0003676
Mibi12g0592 989 Gene3D paz domain 336 464 - -
Mibi12g0592 989 FunFam Protein argonaute 7 337 463 - -
Mibi12g0592 989 CDD PAZ_argonaute_like 353 458 - -
Mibi12g0592 989 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 115 950 - -
Mibi12g0592 989 SMART DUF1785_2 290 342 IPR014811 -
Mibi12g0592 989 SMART PAZ_2_a_3 350 490 IPR003100 GO:0005515
Mibi12g0592 989 MobiDBLite consensus disorder prediction 86 129 - -
Mibi12g0592 989 FunFam protein argonaute 10-like 707 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0592 Mibi-ChrMibi12 14558656 14562198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0592 128 989 Eukaryotic Initiation Factors Gene Family AT1G48410 41.383 0.0 645