Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0564 ATGATACAGGGTAAAAGTGGGAGTCACTTTGAACCAAAGCCTGTTGCTCCTCTACTGCCTAACAAGTGTGATTGGGAAATAGACCCTTATGAGATGGACTTCACAAATTCAGTTCGCATTGGAAAGGGATCTTTTGGTGAAATTTTGAAAGCACATTGGCGTGGAACCCCTGTTGCTGTCAAATGCATTCTTCCATCTCTCTTAGATTATAGATTGGACTTCAGGCATGATGTTAATTTGCTAGTTAAGGTTCGACACCCTAATATAGTCCAGTTTGTTGGAGCTGTAACTGATAAAAAGCCTCTTTTGTTAATTACTGAGTGTCTAAGATCAACTATCCCTCCTAAAATATTGTGCATATGTGTCTTTGTTCTTAGTCTCATTGGTATTGATTGTGTGCATGAAATTGCCTGCTGA 417 0.3933 MIQGKSGSHFEPKPVAPLLPNKCDWEIDPYEMDFTNSVRIGKGSFGEILKAHWRGTPVAVKCILPSLLDYRLDFRHDVNLLVKVRHPNIVQFVGAVTDKKPLLLITECLRSTIPPKILCICVFVLSLIGIDCVHEIAC 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0564 138 ProSiteProfiles Protein kinase domain profile. 34 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0564 138 Pfam Protein tyrosine and serine/threonine kinase 38 110 IPR001245 GO:0004672|GO:0006468
Mibi12g0564 138 Gene3D Phosphorylase Kinase; domain 1 18 109 - -
Mibi12g0564 138 SUPERFAMILY Protein kinase-like (PK-like) 32 110 IPR011009 -
Mibi12g0564 138 FunFam serine/threonine-protein kinase STY46-like 27 110 - -
Mibi12g0564 138 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 37 109 - -
Mibi12g0564 138 ProSitePatterns Protein kinases ATP-binding region signature. 40 61 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0564 Mibi-ChrMibi12 13657375 13659758 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0564 4 110 MAP Kinase Kinase Kinase AT1G14000 73.636 2.52e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Mibi12g0564 PK_Tyr_Ser-Thr 1.4e-12 CL0016