Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0557 ATGGAAGACAAACACAAACACAAAGCAGAATCGTCATCCTCATCTCGCCCTCAAATATCTCCCACCGACTCTTCCACCTGGACGCTCCCTGCCGATGACTCAGACGCCGCCTATTTCTTCTCCGGCGACCGAGAAACCAGCACAATACTTGGCGATTTTGGCTGGAATCTCGAACCCGAACAACCGCACCGGATCGCAGATGCGGCTGAAGGAGAATTCCGGCACGGCGGCGGAGGAGGATTTTGGTTTCCAGATCACTCTGCTCCCGGTCGCCCGACGGAGCAAGCCGATACCGCGAACCCTGCCGCCGCCGACACATCGAATAATCAATCTGCGTCTTCGAGCTCGAGCGAAGATCCGGCCGAGAAATCCGCCGTCTCTGACGAAAAACCGCCCGAGATACCGAGTAAAAGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACAAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGCAAGTATGGCCAAAAAGCTGTAAAAAATAGTCCATTCCCTAGGAGCTACTATAGGTGCACAAATAGCAAATGCACTGTGAAGAAAAGAGTGGAACGCTCATCAGAAGACCCAACCATTGTAATAACAACGTACGAGGGCCAACATTGTCATCACACTGTTGGCTTCCCTAGAGCAGCAACATCAATTATGAGCCACCATGAAGCCGCCGCGGCCGCTGCCTCATTTGCCGGCGGCACCGGCCAGTTCGCTCCGACAATGTCTCATTTCTATTATCCAGTCCCATTACCATCATCAGACAACAACAACAATAATAGTAACCTTTCTTCTCATCAATCTCATCCTCACCATAACCATAATGAAGCCGCACGCACAGGATCATCACCTCCCAGCACGGTAATACGCCCAGATAATGCTGCCTCCAACTCCCAGCAGCCTCCCGCCGCCGATCAAGGACTTCTCGGAGACATTGTTCCCCCCGGAATGCGTAATGGATGA 1002 0.52 MEDKHKHKAESSSSSRPQISPTDSSTWTLPADDSDAAYFFSGDRETSTILGDFGWNLEPEQPHRIADAAEGEFRHGGGGGFWFPDHSAPGRPTEQADTANPAAADTSNNQSASSSSSEDPAEKSAVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRAATSIMSHHEAAAAAASFAGGTGQFAPTMSHFYYPVPLPSSDNNNNNSNLSSHQSHPHHNHNEAARTGSSPPSTVIRPDNAASNSQQPPAADQGLLGDIVPPGMRNG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0557 333 SUPERFAMILY WRKY DNA-binding domain 154 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi12g0557 333 MobiDBLite consensus disorder prediction 122 139 - -
Mibi12g0557 333 FunFam WRKY transcription factor 57 148 222 - -
Mibi12g0557 333 Pfam WRKY DNA -binding domain 163 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi12g0557 333 MobiDBLite consensus disorder prediction 1 151 - -
Mibi12g0557 333 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi12g0557 333 MobiDBLite consensus disorder prediction 266 281 - -
Mibi12g0557 333 Gene3D WRKY domain 149 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi12g0557 333 MobiDBLite consensus disorder prediction 266 333 - -
Mibi12g0557 333 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi12g0557 333 MobiDBLite consensus disorder prediction 13 31 - -
Mibi12g0557 333 MobiDBLite consensus disorder prediction 290 317 - -
Mibi12g0557 333 MobiDBLite consensus disorder prediction 99 121 - -
Mibi12g0557 333 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 287 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0557 Mibi-ChrMibi12 13431782 13436250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0557 23 332 WRKY Transcription Factor Family AT1G69310 47.937 7.62e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi12g0557 WRKY 2.3e-25 CL0274