Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0556 ATGGAAGATGCACAATCAGATACTGAAACTTCTGATCCAGACGATTTGAAGAGAAGAAGGTTCATGACCCTGAATTATAACAACCCAACTTCTTCTGTATCAGAGGTTGAACAAGTAGAGGAAGGAGTAGAAGAGGCAGCTACTTGCTTGATATTGCTGTCTAAGGGTTTTTATAGTAACAAAAGCCGTTTTGATTTGGAAAAAGATTCTAATTCTGATAACTATTCTGCAGTTTTAGAGGCCAAATCACAATATGTTTATGCTAAAATTGGCATACATGATGGTCAGAATAGGGTTAATAAATCTGTTTATGATCCTTCTGAGATTGTGAAGCTAGGAAAGGACAAGATGAAGTTGAAGTTTTCAGATTCTGGGTATTCTAGATATGATTCCATAAAGAAAGATTCAAAGGTTTCAATTCATGGGGTTTTAAGGAATGGTGGTTTTAATGGACCAAAAGTGGAAGATGGGTATGGATTTAAGGATTTTGATGTCTCTGAACCAAGGAAGATGATAATGAATAGCAGAATCAGGGACAGTGTATCCAAGAAACTAGTGTTGGGAAATTCAGACAAGTTTGATGATTTATTCAACGGTGCCATACAAGAATATCTTGGTCACAATTTGGATGCTCAAGTTTCCAGCAAGAACAAGAAAACCAGTTTTCCCAACAATCAAGTGTGCAAGAAAGAGCCATATGACTCAGAATCATCATCATATGGTAGTGCTGAGAAAAGCATAGACACTACTGATTCTGATTCTTTTCCTTATTCTTATCAGAAGTCTAAGAGCAGTAACAAAGCCAAGAGTAAGAAAGTGATGAAGAAGTCAAAGAAGAAAACAAAGGAGCATGAGTGCCCAATCTGCAACAGAACTTTCAGGTCTGGCCAAGCCTTGGGAGGTCATAAAAGGTCCCATTTTGTAGGTGGATTTGAAGAGAACAAAAACAACAATGGATTCATAGTCAAAAAAGAATCTCTTTCTCTTTCTCCTTCTCCTGCTGTTGTTCCTTGCCTCATTGATCTTAATCTACCTGCTCCTTCTAGTGAATAG 1053 0.3742 MEDAQSDTETSDPDDLKRRRFMTLNYNNPTSSVSEVEQVEEGVEEAATCLILLSKGFYSNKSRFDLEKDSNSDNYSAVLEAKSQYVYAKIGIHDGQNRVNKSVYDPSEIVKLGKDKMKLKFSDSGYSRYDSIKKDSKVSIHGVLRNGGFNGPKVEDGYGFKDFDVSEPRKMIMNSRIRDSVSKKLVLGNSDKFDDLFNGAIQEYLGHNLDAQVSSKNKKTSFPNNQVCKKEPYDSESSSYGSAEKSIDTTDSDSFPYSYQKSKSSNKAKSKKVMKKSKKKTKEHECPICNRTFRSGQALGGHKRSHFVGGFEENKNNNGFIVKKESLSLSPSPAVVPCLIDLNLPAPSSE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0556 350 MobiDBLite consensus disorder prediction 215 283 - -
Mibi12g0556 350 ProSitePatterns Zinc finger C2H2 type domain signature. 286 306 IPR013087 -
Mibi12g0556 350 MobiDBLite consensus disorder prediction 265 279 - -
Mibi12g0556 350 Pfam C2H2-type zinc finger 284 306 - -
Mibi12g0556 350 ProSiteProfiles Zinc finger C2H2 type domain profile. 284 306 IPR013087 -
Mibi12g0556 350 SUPERFAMILY beta-beta-alpha zinc fingers 281 307 IPR036236 -
Mibi12g0556 350 MobiDBLite consensus disorder prediction 215 264 - -
Mibi12g0556 350 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 349 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0556 3 350 C2H2 Transcription Factor Family AT1G26610 30.000 5.11e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi12g0556 zf-C2H2_6 2.8e-11 CL0361