Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0547 ATGGCTTCCGAGCGTGATACCCACGTTTACATGGCCAAGCTCTCTGAGCAGGCCGAGAGATACGACGAAATGGTTGAGCATATGAAGGCAGTGGCAAAACTTAATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCTGTGGGATATAAAAATGTCATTGGTGCTAGGCGAGCATCATGGCGTATTATGTCTTCAATTGAGCAGAAAGAAGAGTCTAAGGGAAATGAGAACAATGTTAAACTGATTAAGAGTTACCGCCTAAAGGTTGAGGAGGAACTCTCTAAGATTTGTGGTGACATTCTCACAATTATTGATGAACATCTTATACCCTCTTCCACATCTGGAGAAGCCACTGTTTTTTACTATAAGATGAAAGGTGACTACTATAGGTACCTTGCTGAGTTCAAGACTGACCAAGCAAGGAAAGATGCAGCTGAGCAGTCCCTCAAGGGTTATGAAGCTGCTTCAGCCACTGCCAACACAGAACTTTCATCCACACACCCAATCCGTCTTGGGCTTGCGCTTAATTTCTCTGTGTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCATGTCATTTGGCTAAACAAGCATTTGACGAGGCCATTGCAGAGTTGGATACGTTGAGTGAGGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACTTGACCCTGTGGACCTCCGATTTGCCAGAAGATGGAGGTGAAGATGGTACCAAAATTGAGGAAGCCAAACCAGCTGAACCTGAGAAGAACTAG 777 0.444 MASERDTHVYMAKLSEQAERYDEMVEHMKAVAKLNLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIKSYRLKVEEELSKICGDILTIIDEHLIPSSTSGEATVFYYKMKGDYYRYLAEFKTDQARKDAAEQSLKGYEAASATANTELSSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDGTKIEEAKPAEPEKN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0547 258 PIRSF 14-3-3 1 245 IPR000308 -
Mibi12g0547 258 Pfam 14-3-3 protein 11 233 IPR023410 -
Mibi12g0547 258 SMART 1433_4 5 246 IPR023410 -
Mibi12g0547 258 Coils Coil 11 31 - -
Mibi12g0547 258 MobiDBLite consensus disorder prediction 235 258 - -
Mibi12g0547 258 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Mibi12g0547 258 PANTHER 14-3-3 PROTEIN 5 235 IPR000308 -
Mibi12g0547 258 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Mibi12g0547 258 Gene3D - 1 244 IPR036815 -
Mibi12g0547 258 Coils Coil 193 213 - -
Mibi12g0547 258 FunFam 14-3-3 protein epsilon 1 247 - -
Mibi12g0547 258 SUPERFAMILY 14-3-3 protein 3 235 IPR036815 -
Mibi12g0547 258 MobiDBLite consensus disorder prediction 239 258 - -
Mibi12g0547 258 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Mibi12g0547 258 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Mibi12g0547 258 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Mibi12g0547 258 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Mibi12g0547 258 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Mibi12g0547 258 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0547 Mibi-ChrMibi12 13089987 13092508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0547 4 258 14-3-3 family AT1G26480 85.385 6.95e-164 452