Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0522 ATGGAAAACTACAGTAATAACAGTACTGAATTACGTTGGAGAGCTGAAGAAGCCATTGCTGGCAACGCAAAAGCTCTTCAAGCTCTTAGAGAACTCGTCATATTCCCCCTTCTCTACTCTCGCCAAGCTAGAAAGCTTGGTATCAAATGGCCGCAGGGATTGTTGCTGTACGGTCCTCCAGGCACTGGAAAGACAAGTCTAGTACGAGCAGTTGTTCAGGAATCTGGAGCACATTTGACAATGATCAGTCCTCATTCTGTCCATAAAGCACATGCTGGGGAGAGTGAGAGAATTCTCCGTGAGGCCTTTGCAGAGGCATCATCTCATTCAACTCTGGGAAAACCATCAGTTATCTTTATAGATGAAATAGATGTACTCTGTCCTCGGCGAGATTCCAGAAGGGAGCAAGATGTTCGCATTGCTTCCCAGCTCTTCACATTGATGGATTCAAATAAACCATCCTCATCTATGCCAAGAGTTGTTGTTGTTGCAGCTACTAACAGAGTGAATGCAATAGACCCCGCCCTTAGAAGGTATGGACGTTTTGATGCTGAAATCGAAGTTACTGCCCCAAATGAAGAGGAGCGTTTTCAAATTCTTAAGCTTTACACAAAGAAGATTCCCTTGGATCCCAATGTTGACTTAAAAATGATAGCTGCATCTTGCAATGGATATGTTGGGGCTGATTTGGAAGCCTTGTGCCGTGAGGCTATTACATTAGCAGCCAAAAGGACCAGAGATGCAAATGGAAATGCTAGTCACTTAAGCACAATGATGGAAGACTGGAACAATGCAAGATCTGTCGTTGGTCCAAGCATAACAAGAGGTGTCACAGTCGAAATTCCTAAAGTGACTTGGGACGATATTGGGGGACTAAAAGAGTTAAAGAAAAAGCTTCAGCAAGCTGTTGAATGGCCTATCAAGCATTCTGAAGTGTTTTCGAGATTGGGCATTTCGCCAGTACGAGGGATTCTCTTGCATGGGCCTCCAGGATGTTCCAAAACAACCCTTGCCAAAGCTGCTGCACATGCTGCCCAAGCTTCTTTCTTTTCCTTGAGTGGTGCAGAAATGTATTCTATGTATGTCGGAGAGGGGGAAGCATTACTTCGGAACACATTTCATAGAGCACGCCTTGCAGCACCCAGCATAATATTTTTTGATGAGGCTGATGTGGTAGCCGCCAAACGAGGTGATGCTTCGAGCAACAGCAGTACAGTTGGAGAGAGGCTTTTATCCACTCTTCTGACTGAAATGGATGGTTTAGAAGAAGCTACAGGAATTCTTGTTTTGGCAGCTACAAATCGCCCGTATGCAATAGACGCTGCACTAATGCGCCCTGGACGTTTTGATTTGGTGCTGTATGTGCCCCCACCAGATTCGGAAGCTCGATATGAAATACTTTGTGTACATACACGGAGCATGAAGCTTGGGAATGATGTCAATCTCAGAAGACTAGCAGAAGATACTGAACGATTCACAGGTGCCGAACTCGAGGGTTTGTGCAAGGAAGCTGGAATCGTTGCTCTTAGAGAAGACATATCTGCTACCGTTGTGTGTGATCGCCATTTCCAGATCGTGAGAAATTCTGTGAACCCAGCATTATCAATAGAAGAAATTGATTCTTATTCATCTTTCATGAAGACTGCATCTTCAGCCTTTTCTAGGCATTTAGAAAGTTCAAAACTTTATAGAAAGAAAAGTAATAGTAACATTTTTGGCTCCATGATTAAACTTGGTATTGTCAGCTGTATACTAGTTGCCGCTACAAAATACTTTTTCATGCATGAAGAACAATCTGTACATGATGTAGCTGTCACATGA 1821 0.436 MENYSNNSTELRWRAEEAIAGNAKALQALRELVIFPLLYSRQARKLGIKWPQGLLLYGPPGTGKTSLVRAVVQESGAHLTMISPHSVHKAHAGESERILREAFAEASSHSTLGKPSVIFIDEIDVLCPRRDSRREQDVRIASQLFTLMDSNKPSSSMPRVVVVAATNRVNAIDPALRRYGRFDAEIEVTAPNEEERFQILKLYTKKIPLDPNVDLKMIAASCNGYVGADLEALCREAITLAAKRTRDANGNASHLSTMMEDWNNARSVVGPSITRGVTVEIPKVTWDDIGGLKELKKKLQQAVEWPIKHSEVFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAEMYSMYVGEGEALLRNTFHRARLAAPSIIFFDEADVVAAKRGDASSNSSTVGERLLSTLLTEMDGLEEATGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDSEARYEILCVHTRSMKLGNDVNLRRLAEDTERFTGAELEGLCKEAGIVALREDISATVVCDRHFQIVRNSVNPALSIEEIDSYSSFMKTASSAFSRHLESSKLYRKKSNSNIFGSMIKLGIVSCILVAATKYFFMHEEQSVHDVAVT 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0522 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 248 IPR027417 -
Mibi12g0522 606 FunFam Cell division control protein 48-B-like protein 274 458 - -
Mibi12g0522 606 ProSitePatterns AAA-protein family signature. 427 445 IPR003960 GO:0005524|GO:0016887
Mibi12g0522 606 Gene3D - 191 273 - -
Mibi12g0522 606 Pfam ATPase family associated with various cellular activities (AAA) 54 188 IPR003959 GO:0005524|GO:0016887
Mibi12g0522 606 Pfam ATPase family associated with various cellular activities (AAA) 324 456 IPR003959 GO:0005524|GO:0016887
Mibi12g0522 606 CDD AAA 20 188 - -
Mibi12g0522 606 FunFam Cell division control protein 48 homolog B 11 189 - -
Mibi12g0522 606 FunFam spermatogenesis-associated protein 5-like protein 1 458 544 - -
Mibi12g0522 606 SMART AAA_5 50 192 IPR003593 -
Mibi12g0522 606 SMART AAA_5 320 459 IPR003593 -
Mibi12g0522 606 CDD AAA 290 457 - -
Mibi12g0522 606 ProSitePatterns AAA-protein family signature. 160 178 IPR003960 GO:0005524|GO:0016887
Mibi12g0522 606 Gene3D - 459 550 - -
Mibi12g0522 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 282 543 IPR027417 -
Mibi12g0522 606 Gene3D - 5 189 IPR027417 -
Mibi12g0522 606 Pfam AAA+ lid domain 212 254 IPR041569 -
Mibi12g0522 606 Pfam AAA+ lid domain 479 524 IPR041569 -
Mibi12g0522 606 Gene3D - 274 458 IPR027417 -
Mibi12g0522 606 PANTHER AAA-FAMILY ATPASE 17 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0522 Mibi-ChrMibi12 12491244 12498486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0522 236 555 Calmodulin-binding Proteins AT3G56690 42.900 1.24e-80 272