Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0518 ATGAGGATGTGTATGTTGTTATACACTTACAAACTCGGTGCTAACTCCAGCTGTGTCCAACTGTTTCATTCACTGTACGTTGCGGTGAAAATGGATCACACCACTCTCTCTGCCGTCCGAACTCGCAAATCCACACCCAACTCCGACCAAAGCCGGAGGAGTGTACGGAATGCAAGAAGCAATGAAGATCCATTTGCCACAATGGTCTACAAAGAACACAACGGCCACGAAGAAGACGAAGACGACGACGACGACGACTCCTCCCTCCCTCCTCTTCTCAAGCGCCTCCCCAAGGACTTCGGTGGTGGAGCCTCCATGGACTACGAAGAAGAAGAAGAAGAAGAAGACGATCCTCACGACGACGATGCAGGCGATTTCGGCACCATGATCGTTAAGACCAATCGAAATCGGCCTTCTTCTTCTTCCAAGTCTCCAATGGCGGATGAAGAAGAAGAAGATGATGATGATGGTGAAGAAGAGGGATTTTCAACTTTTGTGGTGCGTAAAACGGCTAGGTCTAATGAGAGAGAGTCGGTGAGTGGAACTGTGGTGCGTAGGACAAGTGGTGGTGGTAGTGGTGGTGGAAGTGGCTCCTCCTTGACAATGGAAAGAGCGGTTGCGAGTATGCAAGCATCGTCGGGTGAGATTGGGTTTGGGAAACAGAGGAGAGGAGGAAGTAGTAGTGGGCCTTTGCAGAATGATGAGGGTAGGCAGCAGTTAATAGGGACGAAGGTTTCATCCAGTTCTATCCCTGAAAGTGTCACCAGAGGAGAGGATCCTACTACTAAGTATGAATTGCTCAATGAACTTGGGAAGGGGTCTTACGGGTCTGTTTACAAAGCTAGGGATTTAAAAACCTCCGAGCTCGTTGCTATCAAGGTCATTTCCCTTTCTGAAGGGGAGGAGGGATATGAAGAAATCCGTGGTGAAATTGAGATGTTGCAGCAATGTAATCATCCAAACGTGGTCCGCTATCTTGGAAGCTATCAGGGAGAAGAGTATCTTTGGATAGTTATGGAATACTGTGGTGGTGGTAGTGTTGCTGACCTGATGAACGTGACTGAGGAGCCACTGGATGAGGGTCAGATAGCATATATCTGTAGAGAAGCACTAAAGGGGCTTGAGTATTTGCACTCCATTTTCAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACCAGGACCATGTCCAAGCGAAACACGTTCATTGGAACGCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGGAAGGTAGACGTTTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCTGAGGGCCTTCCTCCAAGATCAGCTGTCCATCCAATGAGGGTTTTGTTTATGATATCCATTGAACCAGCACCAATGCTTGAGGATAAAGAAAAATGGTCTCTACATTTTCACGACTTTGTTGCTAAGTGCCTTACAAAGGAACCACGTTCACGGCCCACCGCATCAGAGCTGTTAAAGCACAAATTCTTTGACAAATGGAAAACTGGATCAACAGCAATGATGCCTAAAATTGAAAAGGCCAGGCAAATCAGGAAAACGATGGCTTTGCAAGCACAAACTATTGCTCCAGCTGCAGTAGAAGATCAGTCAAATGAGATAAAACTGAATGATGACTATGGAGACACTGTTCCATCAAGACCTCTTGACATTGGGGTTCAAGGGGTAGGCGGTCTTCCCTCAGGCGGAACTCTGAAGGAGCTAAATAGATTGAAAAGTGTGGAGTTGAGTGAAGGTAACTTTGGCACTGTAGTAGTCCATGGAGATGAGGTTGATACAGCAGCAGTTAGGTCACATGGTGCAGATACTGCAGATTCCACCTCTGCTTCCTTCATTAGTGGAACAGGAGGCAGATTGGCTGATTCCCGGGCGGAGAGTCTAAACGTGGCGGTCTCAAGTGATGCCTCTGTCGGGGGTTTGGGTGGTCACACTAATACCATAACATCATCTTTATCTCCTGTTAATGACTCGGCTGAGCTGAATCACAACGTAAGAGAAGATTTTCAAGCACCAGGTGGAGTCAGCAGTGGTAGAAGGAATGGTACATTGAAGAATGAAACAGTCAGCAGAAAAGCATTTGCTTTACAGGATAAGCTTTGGTCAATTTATGCAGCTGGTAATACAGTACCCATTCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCCTATCAGACAATGTTCTTGGTGGTATGCAACAAGATACAACTGGAACTGCCTCAGTAGAAGCATTGCATGAGCTTTTTAGTGGTGACGGACAGTCCAAAAGGGGCCGCAGAGGGCAAATTGAGATGCCTGTTCCTCCAAGCATTTACCAGAGACTGACATCAAGTTCTACTCTGCTGAATTTGGCCCAGGCTCTAGCTTACCATAAGATGTGTTATGAAGACATGCCGCTGCAGGAGTTGCAGGCATCCCAAGAGCAGCAGACCATTCAAAACCTCTGCGACACTCTTCGTACTATTCTTCGCTTGTAG 2562 0.4668 MRMCMLLYTYKLGANSSCVQLFHSLYVAVKMDHTTLSAVRTRKSTPNSDQSRRSVRNARSNEDPFATMVYKEHNGHEEDEDDDDDDSSLPPLLKRLPKDFGGGASMDYEEEEEEEDDPHDDDAGDFGTMIVKTNRNRPSSSSKSPMADEEEEDDDDGEEEGFSTFVVRKTARSNERESVSGTVVRRTSGGGSGGGSGSSLTMERAVASMQASSGEIGFGKQRRGGSSSGPLQNDEGRQQLIGTKVSSSSIPESVTRGEDPTTKYELLNELGKGSYGSVYKARDLKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLHFHDFVAKCLTKEPRSRPTASELLKHKFFDKWKTGSTAMMPKIEKARQIRKTMALQAQTIAPAAVEDQSNEIKLNDDYGDTVPSRPLDIGVQGVGGLPSGGTLKELNRLKSVELSEGNFGTVVVHGDEVDTAAVRSHGADTADSTSASFISGTGGRLADSRAESLNVAVSSDASVGGLGGHTNTITSSLSPVNDSAELNHNVREDFQAPGGVSSGRRNGTLKNETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDTTGTASVEALHELFSGDGQSKRGRRGQIEMPVPPSIYQRLTSSSTLLNLAQALAYHKMCYEDMPLQELQASQEQQTIQNLCDTLRTILRL 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0518 853 MobiDBLite consensus disorder prediction 161 175 - -
Mibi12g0518 853 ProSitePatterns Protein kinases ATP-binding region signature. 270 293 IPR017441 GO:0005524
Mibi12g0518 853 CDD STKc_MAP4K3_like 263 518 - -
Mibi12g0518 853 Pfam Protein kinase domain 264 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0518 853 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 251 555 - -
Mibi12g0518 853 MobiDBLite consensus disorder prediction 39 54 - -
Mibi12g0518 853 SMART serkin_6 264 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0518 853 Gene3D Transferase(Phosphotransferase) domain 1 260 557 - -
Mibi12g0518 853 MobiDBLite consensus disorder prediction 106 122 - -
Mibi12g0518 853 FunFam serine/threonine-protein kinase dst1 isoform X1 261 552 - -
Mibi12g0518 853 MobiDBLite consensus disorder prediction 225 256 - -
Mibi12g0518 853 MobiDBLite consensus disorder prediction 39 261 - -
Mibi12g0518 853 MobiDBLite consensus disorder prediction 176 208 - -
Mibi12g0518 853 SUPERFAMILY Protein kinase-like (PK-like) 261 519 IPR011009 -
Mibi12g0518 853 ProSiteProfiles Protein kinase domain profile. 264 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0518 853 FunFam Aurora kinase A 257 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0518 Mibi-ChrMibi12 12402541 12420376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0518 31 853 MAP Kinase Kinase Kinase Kinase AT1G69220 58.995 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Mibi12g0518 Pkinase 3.5e-70 CL0016