Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0512 ATGGCTCCCAATACAACCCCCAATTCGAGACCTGCCAAGGCCTTCAGCGTTATGAATAAATTGGGAGTATCTCGTGAGGAAGTGGAACCAGTGTTGCAAGAGCTGTTAAGATTGTTTGATAAGAAATGGGAATATATTGAAGAAGATAACTATCGGACACTTATAGATGCTTACTTTGAGCTTACGCAAGACACGGAATCAAAATGTAAGAGAAAAGCTCTCGTCAGTCATCATGGTGGAGAAAGACAATCCCAATCGTTGGCAGATAAAGATGATGTGCATGTGCTAACTGAGGACAACTCAAAACAAATATTAGCCGCAGAAAAGAATAAAATGACTCAAAGTACTTTTGGACGGGAAATTGTTGAATCATCTCAACCTTTGATGAGCAATACGAGACCTAAAATCAGACCTCAGTCATTGAAAACCAGAATTAGTGAGGTAGAGAGGGTCCCCAAGTTGCCACGCATGGCCACTACAGATAGAAAATCAAATTCTGAGAATGAGTCTTCTGCAAGGCATGGGGAAGAACCTGTTGATAGGCCTATCTCTGCTTCATTTCGAAGAGAGGATATACCAAATGGACATTATAAGAAAGAGATAAGGAAGCCAAAATCTGGACACAGTAAGTTACATCTTGGATCCAGTTCAACAAGTTGCAGAGGTTCGTCTGAGGATCTAACTGGAAATAATCCAGTCAAGCCAGTATCTTCTGTCTATCTGGATCTGAACAGTGTCATTGATGATTCTATACATGATAACAATGCTACAGGCAGCAAAGCTAGTATTGACATTGCTTCTTCATCATTTGGAGATGTGAAAATTTTCTTAAACTGTGATCGCGCACTTAGACAACCAAACTTCACCACCCCAAGCTTAAAGGATGTTTTGAAGTTCATGGAGGACAAGTACCGTAAGTCTAGAGATATTGTTGGACCCCGATTTTCTATGGTGAATGTATTAAACGGTTTGTGTGAGAGTTTCCTGAAATTGGGTATAAGTACAACCGGATTGACAAATGGCACAGAAAAAGCTGTTGCTCAAGATGAGAGGAAGCTATTTCGGTTTCTTAATGACATAACAAAAGGCTCAGAAATGGTGAAGATACCATTGATAGATGAGTATGGTAGTGGGGAATTACCGACGTTTAATTATATACCACATAATCTAATATATCAGAGTGCTAATGTGAATATCTCACTGGCTCGTATAGCGGATGAAGGCTGCTGCTCAAATTGTAAAGGAGACTGTCTTTCTCAATCACTACCTTGTGCATGTGCTCAAGAAACTGGTGGAGAGTTTGCTTACACGCTGCAGGGCTTGTTGAAAGATGAATTTCTAACATCTTGCATGTCAATGAAAATGGAACCTCAAGCTCATCAATTGGTGTACTGTCAAGAGTGCCCACTAGAGAGGTTTAAGAATGAATTCATGCCCGAGCAATGCAAGGGACATCCAATCAAGAAGTTCATTAAGGAATGTTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGTATAGTGTACTTTACTGGTGAAGAAAAGGGCTGGGGCCTTAGAACAACGGAAGATTTGCCTAAGGGATCCTTTATATGTGAATATGTGGGTGAAATATTGACCAACATGGAGTTGTATGAAAGAACTATGCACAAAAATGGCAATGACAGACATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCAGAAGGGGTGTTGAAGGATGAGGAGGCACTGTGTCTAGATGCAACATATAATGGAAATGTTGCCAGGTTTATCAATCATAGATGCTCAGATGCAAATCTGATTGACATTCCTGTTGAAGTAGAGACTCCTGATCGCCATTATTATCATCTTGCCTTCTTTACTAACAAGAATGTGAGAGCTTACGAGGAGTTGACTTGGGATTATGGTATTGACTTTGATGATCATGATCACCCTATCAAAGCATTCCAATGTTCTTGTGGGAGCTTATTCTGCCATGATAAGAAGAGGAAAGTCTCTTTCAAGGAGTTAAGAGTACGAAGAGTCTACCACATTAGTTTTAGAATCTGCTTAGCAGCTATCATGTGGTTGCTCCCCAATCTTAAAGATATTAAACCAAGCCAGATTTGTGGTATCACTGTTGGTGTTTAA 2139 0.4039 MAPNTTPNSRPAKAFSVMNKLGVSREEVEPVLQELLRLFDKKWEYIEEDNYRTLIDAYFELTQDTESKCKRKALVSHHGGERQSQSLADKDDVHVLTEDNSKQILAAEKNKMTQSTFGREIVESSQPLMSNTRPKIRPQSLKTRISEVERVPKLPRMATTDRKSNSENESSARHGEEPVDRPISASFRREDIPNGHYKKEIRKPKSGHSKLHLGSSSTSCRGSSEDLTGNNPVKPVSSVYLDLNSVIDDSIHDNNATGSKASIDIASSSFGDVKIFLNCDRALRQPNFTTPSLKDVLKFMEDKYRKSRDIVGPRFSMVNVLNGLCESFLKLGISTTGLTNGTEKAVAQDERKLFRFLNDITKGSEMVKIPLIDEYGSGELPTFNYIPHNLIYQSANVNISLARIADEGCCSNCKGDCLSQSLPCACAQETGGEFAYTLQGLLKDEFLTSCMSMKMEPQAHQLVYCQECPLERFKNEFMPEQCKGHPIKKFIKECWRKCGCDMQCGNRIVYFTGEEKGWGLRTTEDLPKGSFICEYVGEILTNMELYERTMHKNGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCSDANLIDIPVEVETPDRHYYHLAFFTNKNVRAYEELTWDYGIDFDDHDHPIKAFQCSCGSLFCHDKKRKVSFKELRVRRVYHISFRICLAAIMWLLPNLKDIKPSQICGITVGV 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0512 712 FunFam SET-domain containing protein lysine methyltransferase family protein 360 664 - -
Mibi12g0512 712 Pfam Ubiquitin-binding WIYLD domain 9 61 IPR018848 GO:0018024
Mibi12g0512 712 MobiDBLite consensus disorder prediction 116 139 - -
Mibi12g0512 712 MobiDBLite consensus disorder prediction 140 200 - -
Mibi12g0512 712 SUPERFAMILY SET domain 368 661 IPR046341 -
Mibi12g0512 712 MobiDBLite consensus disorder prediction 116 231 - -
Mibi12g0512 712 Gene3D - 2 64 IPR043017 -
Mibi12g0512 712 Gene3D SET domain 360 664 IPR046341 -
Mibi12g0512 712 Pfam SET domain 517 639 IPR001214 GO:0005515
Mibi12g0512 712 ProSiteProfiles SET domain profile. 504 639 IPR001214 GO:0005515
Mibi12g0512 712 SMART preset_2 357 499 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi12g0512 712 CDD SET_SETDB-like 381 639 - -
Mibi12g0512 712 Pfam Pre-SET motif 360 507 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi12g0512 712 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 669 - -
Mibi12g0512 712 MobiDBLite consensus disorder prediction 210 231 - -
Mibi12g0512 712 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 704 IPR025776 -
Mibi12g0512 712 SMART set_7 506 645 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0512 Mibi-ChrMibi12 12196772 12202480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0512 483 660 C2H2 Transcription Factor Family AT2G23740 34.896 7.71e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi12g0512 Pre-SET 2.4e-17 No_clan