Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0506 ATGAACGTGGAAGAGAAAGCGAGCATGGAGTTGGTTCAGCCATCTGAACATTACTGCTATGTGCGTTGCAACTTCTGCAACACCGTGCTCGCGGTGGGGATACCATGCAAGAGGCTGTTGGACACAGTGACAGTGAAGTGTGGACATTGCAGCAACCTTTCCTTCCTCAGCACAAGGCCTCCTCCTTCATCATCGTCATCTCATCATCACATTAATCACAACGAAACCCATCACCACTACCATCATCGTGATTCCCATGATACTACTATTGATCACACCCTCACCCTTCAGGGGTTTTATGGAGATTACAAAAAGGGACATGCTTCATCCTCATCATCATCATCCTTAACTATGTCCAACAATGATCCTGTATCCCCCAAGGCACCCCCTTTCGTTGTCAAACCTCCTGAGAAGAAACACCGACTTCCTTCAGCTTACAATCGCTTCATGAAAGAGGAGATACAGCGCATCAAAGCAGCCAACCCTGAGATCCCTCATCGCGAAGCTTTCAGTGCTGCAGCAAAAAATTGGGCAAGGTACATTCCAAATTCCCCAAGCACTTCACTTTCAGCAACTAGGAAAAAGGAATGA 591 0.4704 MNVEEKASMELVQPSEHYCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPSSSSSHHHINHNETHHHYHHRDSHDTTIDHTLTLQGFYGDYKKGHASSSSSSSLTMSNNDPVSPKAPPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSPSTSLSATRKKE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0506 196 FunFam protein CRABS CLAW isoform X3 132 192 - -
Mibi12g0506 196 SUPERFAMILY HMG-box 124 178 IPR036910 -
Mibi12g0506 196 Gene3D High mobility group box domain 120 196 IPR036910 -
Mibi12g0506 196 PANTHER PROTEIN YABBY 6-RELATED 13 187 IPR006780 GO:0007275
Mibi12g0506 196 Pfam YABBY protein 14 180 IPR006780 GO:0007275
Mibi12g0506 196 MobiDBLite consensus disorder prediction 110 139 - -
Mibi12g0506 196 MobiDBLite consensus disorder prediction 110 124 - -
Mibi12g0506 196 MobiDBLite consensus disorder prediction 58 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0506 Mibi-ChrMibi12 12094160 12095917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0506 1 191 C2C2-YABBY Transcription Factor Family AT1G69180 57.949 1.66e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mibi12g0506 YABBY 4.2e-57 CL0114