Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0504 ATGGAATCTTGGAGTTATCTATCAGGAGAGAAAGGCTATTTGACTTCTGATGAGGTAGATTTTTCGCTAGAAGCTTTTATGAGAGGCAAGAAAGGGAAAGATTCATGTAACTTGGAGAGAGATGGATTTGGTTCTAGCGGTGGGGAAGCTAAAAGCATGGAAGTTTTTGAACTGGGATTTCATGACTTGTTTCAAAGTGATCTAGAGAGGAATCATAGTAAAAGAGTGACTTCATCCACCCATGTTGTTGCCATGGATTCATCTTTTGCTGAACAAGAATCTCATCAGCCAATGTTTTTAGGTTCACTAGTTGAATCCAAAAGTCCCAATTCATCACTGATTGATCTGAAGCTAGGGAGAATAGCAGATTGTAGTAAAGATGCACGGAGAGCTCGGTCTTCCGGCTCACCATCTCAGACACCTTTTTGTCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCAAAAGAATACCACAAAAGGCATAGAGTTTGTGATGCTCACTCCAAGACAGCCAGAGTTATTGTTAATGGCATTGAGCAGAGGTTTTGCCAGCAGTGTAGCAGGTTCCATTTACTAGCTGAGTTTGATGAGGGCAAGCGCAGTTGTCGCAGACGTCTAGCCGGACACAATCAACGCAGAAGGAAGCCTCAGTTTAATTGCTTATCTGGTAAACCCTACAAGATGCTCCAGTTACATCAAGGGACCAAATATCTTGAGGCTTCATTTCAGAAAACACCCCAGTCTGCCTCACAAGCCATGACCAGTTGTGGCACATTGTATGAACAAACCAATCTCAGTGTCACGCCCAGCCACGACTTTTCAACAGCCTCATATACAAGCTGTGCTCTCTCTCTTCTGTCAGTTCAGTCACAGAACCCACCATGCCACCCATCAGGAAACCCGGGGCCCAGCTCCCATGCTAGTCACACCGTATGTGTGAACCACACGGATGAAAAAGTTTTCAAAAGAATGCATTTGGGCATAAGCCCTGATGACAAGTATGAGCAAAATGAGTCGTCATTACAACAACAACAACAACAACAACAACATGAATTGAACTCCATGAAAGCTATCAAGAACGAATCCATACTGCTTTCTAATGCTGATTGTGCCGATCATTGTCTTCAGGGTTGCCAAACATCAGAATTATTGGATGCCAAACACTATGTTTCACCTGAGGATGGAGCCACTGTTGATCTATTGCAATTGTCTTCACATCTTCAAAGGGTGGAGCATCAGAGGAATTCATTTCTTCAGTGA 1263 0.4323 MESWSYLSGEKGYLTSDEVDFSLEAFMRGKKGKDSCNLERDGFGSSGGEAKSMEVFELGFHDLFQSDLERNHSKRVTSSTHVVAMDSSFAEQESHQPMFLGSLVESKSPNSSLIDLKLGRIADCSKDARRARSSGSPSQTPFCQVYGCNMDLSSSKEYHKRHRVCDAHSKTARVIVNGIEQRFCQQCSRFHLLAEFDEGKRSCRRRLAGHNQRRRKPQFNCLSGKPYKMLQLHQGTKYLEASFQKTPQSASQAMTSCGTLYEQTNLSVTPSHDFSTASYTSCALSLLSVQSQNPPCHPSGNPGPSSHASHTVCVNHTDEKVFKRMHLGISPDDKYEQNESSLQQQQQQQQHELNSMKAIKNESILLSNADCADHCLQGCQTSELLDAKHYVSPEDGATVDLLQLSSHLQRVEHQRNSFLQ 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0504 420 Coils Coil 342 362 - -
Mibi12g0504 420 ProSiteProfiles Zinc finger SBP-type profile. 140 217 IPR004333 GO:0003677
Mibi12g0504 420 SUPERFAMILY SBT domain 141 221 IPR036893 GO:0003677|GO:0005634
Mibi12g0504 420 Gene3D - 133 204 IPR036893 GO:0003677|GO:0005634
Mibi12g0504 420 FunFam Squamosa promoter-binding-like protein 14 134 204 - -
Mibi12g0504 420 Pfam SBP domain 143 216 IPR004333 GO:0003677
Mibi12g0504 420 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 85 394 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0504 Mibi-ChrMibi12 12051943 12057269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0504 114 416 SBP-box Gene Family AT1G69170 38.483 4.71e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi12g0504 SBP 3.7e-31 No_clan