Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0478 ATGAGGGCTGGGAAAGGGAATCTGGAGGACGATGAGTACGAGGAGGAAGAATTTGGTTCTAAAAAGGAAGGTCCTTCGTCCACGCCTAATAGCAATAATTCTATCAAAGATGCAAAAGCTCTTGATAAGGCTAGCGCTATAAGATCAAAACATTCGGTTACTGAGCAGCGAAGGCGAAGCAAGATAAATGAGAGATTCCAGATATTAAGAGATCTCATCCCTCATAGTGACCAAAAAAGGGATACTGCATCCTTCCTATTAGAGGTCATTGAGTACGTCCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGTTCATATCAGGGTTGGGGTCAAGAGCCCACGAAGTTGATGCCTTGGAGAAACAGTCATTGGCGTGTTCAAAGCTTTGGCCAACCTCAAGCTGTAAAGAATGGTTCTGGTCCTGTATCACCTTTTCCTGGGAAGTTTGATGAAAGCAACATTAGTGTCTCTCCGACTGTGCTCAGTGGCTCTCAAAATATGATTGATCCTGAACAGAGCAGGGATATTGTTAGTAAAGCAGTGGAGAGGCAAGCTGAATTAGAATGCAAAGGGATGCCAATGCCAATGCCTATGCATGCAAACATGTCTGTTCCTGTCAGAAGTGATGGTGCACTTGCCCATCCTCTTCAGGGGCATATTTCTGATGGGCAATCAGCTGAATGTCCAGCCAATAATGAACCTCAGAACCAACAGGAAGAGCTAACAATTGAAGGGGGAACAATTAACATCTCAAGTGCATACTCTCAAGGGCTGTTGCACAATCTTACTCAAGCACTACAGAGTGCTGGTTTAGATCTCTCACAGGCTAGCATTTCAGTTCAAATTAATCTTGGGAAGCGGGCAAACAAAGGACTGGGCTGTGGGACATCTGCTCCTATGAATCATGATAATATCCCTTCTAGCAATCAAGCAATGACACATTTTAGAGATGCAGGCAATGGAGAAGACACAGATCAAGCACAGAAGAGGCTGAAGACGTAG 1005 0.4428 MRAGKGNLEDDEYEEEEFGSKKEGPSSTPNSNNSIKDAKALDKASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGQEPTKLMPWRNSHWRVQSFGQPQAVKNGSGPVSPFPGKFDESNISVSPTVLSGSQNMIDPEQSRDIVSKAVERQAELECKGMPMPMPMHANMSVPVRSDGALAHPLQGHISDGQSAECPANNEPQNQQEELTIEGGTINISSAYSQGLLHNLTQALQSAGLDLSQASISVQINLGKRANKGLGCGTSAPMNHDNIPSSNQAMTHFRDAGNGEDTDQAQKRLKT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0478 334 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 7 334 IPR044295 GO:0003700|GO:0006351|GO:0046983
Mibi12g0478 334 CDD bHLH_AtBIM_like 45 121 - -
Mibi12g0478 334 FunFam BHLH domain class transcription factor 44 116 - -
Mibi12g0478 334 MobiDBLite consensus disorder prediction 23 38 - -
Mibi12g0478 334 Gene3D - 43 116 IPR036638 GO:0046983
Mibi12g0478 334 MobiDBLite consensus disorder prediction 1 59 - -
Mibi12g0478 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 118 IPR036638 GO:0046983
Mibi12g0478 334 MobiDBLite consensus disorder prediction 306 334 - -
Mibi12g0478 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 96 IPR011598 GO:0046983
Mibi12g0478 334 Pfam Helix-loop-helix DNA-binding domain 48 97 IPR011598 GO:0046983
Mibi12g0478 334 MobiDBLite consensus disorder prediction 41 59 - -
Mibi12g0478 334 SMART finulus 52 102 IPR011598 GO:0046983
Mibi12g0478 334 MobiDBLite consensus disorder prediction 319 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0478 Mibi-ChrMibi12 10570170 10576115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0478 1 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 55.325 2.06e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g0478 HLH 1.8e-13 No_clan