Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0450 ATGGCTCAAGATACTGCCAGCACACATTCAAATAATAAGCGCCAAGGTCTCTTGAAAGATCAAGTTCGTCTGGTTAAAAGGAAAGAGTCTGAACGCTACGAGATTGTCCCAATCCATGGTCTTTTATCCTTTGACAAGGGTTTCTTTATAGTAATCCGTGCAAGCCAACTGTTAGCCCAGAATAATGATGGGATGATATTGGTAGGTCTGGCTGGCCCTTCAGGGGCTGGTAAGACTATATTTACAGAAAAAATACTCAACTTCATGCCCGGCATTGCAGTCATTTCGATGGACAATTACAATGATTCTAGTCGAATTGTTGATGGGAACTTCGATGATCCACGCTTAACAGACTATGACACGCTGCTCCAGAATGTCCATGATTTGAAGGCAGGAAAATCAGTTGACATTCCAATCTATGATTTTAAGTCCAGTTCACGCATAGGATACAGAACAGTTGAAGTCCCCAGCTCCCGCATTGTGATCATAGAGGGCATCTATGCATTGAGTGAGAAGTTGCGACCGCTACTGGACCTTAGAGTATCTGTCACAGGTGGAGTTCACTTGGACCTTGTCAAACGAGTTATTCGCGACATACAACGTGCTGGTCAAGAACCTGAAGAAATTATCCATCAGATATCTGAGACGGTCTACCCAATGTACAAGGCCTACATTGAACCAGATCTTCAGACAGCACATATTAAAATTGTCAACAAGTTCAATCCATTTACTGGTTTTCAAAATCCTACCTACATATTAAAGTCAGCAAGGAAAGTAACAGTTGATGAAATTAAAGCTGTTCTCTCTGAAGATTATAAGGAATCAACGGAGCAGACTTATGACATATATCTTCTACCTCCTGGTGAAGATCCAGAGACTTGCCAATCATACCTACGGATGCGGAATAAGGATGGGAAATACTGTCTGATGTTTGAGGAATGGGTAACAGATAATCCTTTTGTTATATCACCAAGAATTACTTTTGAGGTAAGCGTGCGCCTTCTGGGTGGACTGATGGCCTTGGGGTACACGATCGCCGCCATCCTTAAAAGAGACAGTCATGCATTCTCTGATGATAGGATTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTGCATGGAAGAGATCGTATGGTTGTAAAATATGTAGCAGAGCAGCTGGGTCTGGATGGCTCTTACATTCCTCGTACCTACATTGAGCAAATTCAACTTGAAAAGCTTGTAAATGAAATTATGGCCTTGCCAGATGATTTGAAGACAAAGCTTAGCTTAGATGAGGATTTGGTGTCAAGCCCGAAAGAAGCATTGTCTAGAGCTTCTGCTGACAGGGTAGCCATGAGAAATAAGCATGTCAAAAGCTTGTCACAATCATATACAAATCAAAGGGACAAGAATCTTGCCAAACTTGCAATATATTCTTCTAAGAATTGTGGGTTTAGTGAAAGAAATCTGGATTCGCCAACAACATCAAATCAGCTTTTCGAGCAACTTTCCTCTCTTAATGATAGAATGGACGATTTTACAAATTGTGTTGAGGAGCTGAACTCAAAGTTAGCCACCAAAAAAAATTCTCTCAGCCAGCAAAATATGTCTCTCCAAACTGAAGCCTGCAATGGTTCCGCTCCTACCTCTTACTTCCTCACTGGTCTGGGCAATGGCTCCTTAATTGGATCCGTTATGCCAAATTCCTCATCTTCATTGCAGTTAGCTAAAGAGTCGCCTTTAATTGAAGAGTTATCGAGTATTGCAAGGAGTCAGCGTCAGATAACCCATCAATTGGACAATCTGTATAATCTTATACAGGGAAGCACGGCAAACAAGTGTGGCAAAACAAGAAGCTTCAAGAGAACCATGGCCGCTGCTGCTGAATCAGAGTCAATTGGTATGCATGTTATGATGACTCTGTCCATTGGGGTTTTGGGGATCTTCTTGATGAAGGGTTTGTTGAACAGAAACCGATAA 1980 0.4172 MAQDTASTHSNNKRQGLLKDQVRLVKRKESERYEIVPIHGLLSFDKGFFIVIRASQLLAQNNDGMILVGLAGPSGAGKTIFTEKILNFMPGIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKAGKSVDIPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAYIEPDLQTAHIKIVNKFNPFTGFQNPTYILKSARKVTVDEIKAVLSEDYKESTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYCLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIAAILKRDSHAFSDDRICVKLDWLEQLNRHYVQVHGRDRMVVKYVAEQLGLDGSYIPRTYIEQIQLEKLVNEIMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHVKSLSQSYTNQRDKNLAKLAIYSSKNCGFSERNLDSPTTSNQLFEQLSSLNDRMDDFTNCVEELNSKLATKKNSLSQQNMSLQTEACNGSAPTSYFLTGLGNGSLIGSVMPNSSSSLQLAKESPLIEELSSIARSQRQITHQLDNLYNLIQGSTANKCGKTRSFKRTMAAAAESESIGMHVMMTLSIGVLGIFLMKGLLNRNR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0450 659 CDD UMPK_like 67 239 - -
Mibi12g0450 659 PRINTS Uridine kinase signature 224 237 - -
Mibi12g0450 659 PRINTS Uridine kinase signature 65 82 - -
Mibi12g0450 659 PRINTS Uridine kinase signature 132 147 - -
Mibi12g0450 659 PRINTS Uridine kinase signature 188 198 - -
Mibi12g0450 659 SUPERFAMILY CYTH-like phosphatases 262 407 IPR033469 -
Mibi12g0450 659 Coils Coil 503 523 - -
Mibi12g0450 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 236 IPR027417 -
Mibi12g0450 659 Gene3D - 65 259 IPR027417 -
Mibi12g0450 659 Gene3D - 260 413 - -
Mibi12g0450 659 Pfam CYTH domain 264 404 IPR023577 -
Mibi12g0450 659 ProSiteProfiles CYTH domain profile. 252 410 IPR023577 -
Mibi12g0450 659 PANTHER URIDINE KINASE 30 423 - -
Mibi12g0450 659 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0450 Mibi-ChrMibi12 9937619 9946486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0450 53 236 PRT Gene Family AT1G55810 28.351 4.75e-17 82.4