Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0449 ATGGAAAGAAGAGAACGTTTTTCTTTCTCTATTTTAGCTTCCTTCATCATCATCATCATCTTCTTCTTCTTCTGCACTTCAGTATCTGGTTTGCTTTCTTCTAAAGGTGTCAACAATGAAGTACAAGCTCTTATAGGAATTAAAAGTTCCTTAAAGGATCCTAGCAATGCCCTTCATAACTGGGATATGAATGAAGTGGAGCCTTGTAACTGGGCTTGCATATCTTGCTCTGATGGTTCTGTGAGTACCCTGGAATTACAAAGCCAGAAGGTCTTTGGTTCTCTTTCCCCAAGTATCAGCAACTTAACCAATCTCAGGACTCTGAGCCTGCAAGGTAATAATATATCAGGACCAATTCCTTCTGAGATTGGAATGCTTCAAAAGCTTCAAACTCTTGATCTTTCTCATAATTCTTTCACTGGTCAACTTCCAGAGAGTCTTTCCTACATGACGAGTCTCAACTATCTGAGGCTGAACAATAATAGTCTTACAGGTCCAATACCTTCCTCTTTGGCTAACATGACCCAGCTTGCTATTCTGGATATATCTCATAATAACTTGAGTGGTCCTCTACCTACAATAAAAGCAAAATCATTCAATCTTGGAGGAAATCCCAAGATTTGTGCAACTGGAACTGATCAACATTGCTACAGAACAGCACAACCTTCAACTAATTTTACTAACCCTCAAGGTTCTCAAGCCACCAGTAAACGAAAGAATCACAAACTTGTCTTGGTAGCTGCTTTAACGGTGAGCTGTGTCAGCTTACTAACTCTGGTGTTTGGCTTCCTCTGGTGGAGACAAAGATCAAGCAAACAAGTTTTCTTTGACATGAATGAACAAATGCAAGAAGATGTGCGCCTAGGAAACTTGAGGAAGTTCCACATAAGAGAACTTGAGGTTGCAACAAACAAGTTCAGCAGCAAGAATTTGGTTGGAAAAGGAGGATATGGGAATGTGTACAAAGGGTATCTCTCAGATGGAGGGGTCATAGCTGTGAAAAGGCTTAGAGATGGAAGTGCCATTACAGGGGAGATTCAATTCCAGACTGAAGTTGAGATGATCAGCCTTGCTGTACATCGAAACTTGCTTCGTCTCTATGGATACTGCATCACTCCTACTGAGAGACTCCTGGTTTATCCCTTCATGTCCAATGGTAGTGTTGCTTCTCGCCTTAAAGTGAAGCCTGCTTTAGAGTGGACCACAAGGAAGAGGATAGCTTTGGGAGCAGCAAGAGGGTTAGTATACCTACATGAGCAGTGTGATCCCAAAATCATTCATAGGGATGTGAAGGCTGCAAATATATTGCTTGATGACTACTGTGAAGCTGTGGTTGGAGATTTTGGGTTAGCTAAACTCTTAGATCACAGGGATTCACATGTCACCACAGCTGTTCGAGGCACTGTAGGCCATATAGCACCAGAGTACCTCTCAACAGGCCAATCTTCTGATAAAACCGATGTCTTCGGCTTTGGGATTCTCCTCCTTGAACTCATATCTGGCCGCACAGCTATTGAATTTGGAAAAGCAACAAATCAGAAAGGAGCCATGCTCGATTGGGTGAAGAAAATGCATCATGAGAAGAAACTTGACTTGTTGATTGACAAGGACCTTAGGAACAACTATGACAGAATAGAACTGGAAGAAATGGTTCGAATAGCACTCTTGTGTACCCAGTACCTTCCAGCTCATAGACCCAAAATGTCTGAAGTGGTTAGAATGCTTGAAGGGGATGGCCTTGCAGAGAAATGGGAAGCTTCAAAGGGATCAGTTGAATCAACAAGGAGCAGAGCAAATGAGTTATCTTCTTCAGAACGCTACTCTGATCTCACCGACGACTCTACACTGTTTAATCAGGCCATGGAACTTTCTGGTCCCAGGTGA 1884 0.4241 MERRERFSFSILASFIIIIIFFFFCTSVSGLLSSKGVNNEVQALIGIKSSLKDPSNALHNWDMNEVEPCNWACISCSDGSVSTLELQSQKVFGSLSPSISNLTNLRTLSLQGNNISGPIPSEIGMLQKLQTLDLSHNSFTGQLPESLSYMTSLNYLRLNNNSLTGPIPSSLANMTQLAILDISHNNLSGPLPTIKAKSFNLGGNPKICATGTDQHCYRTAQPSTNFTNPQGSQATSKRKNHKLVLVAALTVSCVSLLTLVFGFLWWRQRSSKQVFFDMNEQMQEDVRLGNLRKFHIRELEVATNKFSSKNLVGKGGYGNVYKGYLSDGGVIAVKRLRDGSAITGEIQFQTEVEMISLAVHRNLLRLYGYCITPTERLLVYPFMSNGSVASRLKVKPALEWTTRKRIALGAARGLVYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELISGRTAIEFGKATNQKGAMLDWVKKMHHEKKLDLLIDKDLRNNYDRIELEEMVRIALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWEASKGSVESTRSRANELSSSERYSDLTDDSTLFNQAMELSGPR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0449 627 SUPERFAMILY Protein kinase-like (PK-like) 291 578 IPR011009 -
Mibi12g0449 627 SUPERFAMILY L domain-like 38 201 - -
Mibi12g0449 627 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Mibi12g0449 627 FunFam Somatic embryogenesis receptor-like kinase 1 383 596 - -
Mibi12g0449 627 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 37 197 - -
Mibi12g0449 627 PRINTS Leucine-rich repeat signature 129 142 - -
Mibi12g0449 627 PRINTS Leucine-rich repeat signature 174 187 - -
Mibi12g0449 627 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Mibi12g0449 627 Pfam Protein kinase domain 307 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0449 627 SMART serkin_6 306 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0449 627 MobiDBLite consensus disorder prediction 586 627 - -
Mibi12g0449 627 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Mibi12g0449 627 FunFam Somatic embryogenesis receptor kinase 1 275 382 - -
Mibi12g0449 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Mibi12g0449 627 ProSiteProfiles Protein kinase domain profile. 306 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0449 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 21 586 - -
Mibi12g0449 627 Gene3D Transferase(Phosphotransferase) domain 1 383 594 - -
Mibi12g0449 627 Pfam Leucine Rich repeat 102 117 IPR001611 GO:0005515
Mibi12g0449 627 Gene3D Phosphorylase Kinase; domain 1 275 382 - -
Mibi12g0449 627 MobiDBLite consensus disorder prediction 591 621 - -
Mibi12g0449 627 Gene3D Ribonuclease Inhibitor 36 218 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0449 Mibi-ChrMibi12 9929563 9935352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0449 1 627 Receptor kinase-like Gene Family AT5G16000 66.458 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi12g0449 Pkinase 3e-41 CL0016