Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0420 ATGAGTATTCGTGATATAATAATCACCAGATTTTTTATCCTCCTATCCGCCATGCTGTTTAACTACCCCAAGATAGCTTTGTCCCATTTCAAATGGGTTTTAGAATTCCTTATCTACCATCCATTTTACAGCCTTCGTGTTCATCATCATCTACCTCTTGAAGAGTTTCAGATATATACAGAAGAACAAGAAGTAAAGATATGGTATCCTCGTGAAGGAGGAGAAGGAGGAGGAGTGGATTGTGCAGTGTGTCTGAGCAAGATTGGTGAAGGAGATGAAGTTAGAGTGTTGAGGTGTGAGCATGTTTTTCATAGAGATTGTTTGAATCAGTGGGTTGGTCTCAGGAACTATACTTGTCCTCTTTGTAGGGATTTCCTGGGTTCTAGGAGAAATAGGGTTGTTCATGATGAGGGGAGACAAAGACATGTGATTTTATTCAAGTTTTCTTCGTTTTCTGCTAATTCTGAACGTGACAACTGGTGGCTACGGTGA 492 0.4024 MSIRDIIITRFFILLSAMLFNYPKIALSHFKWVLEFLIYHPFYSLRVHHHLPLEEFQIYTEEQEVKIWYPREGGEGGGVDCAVCLSKIGEGDEVRVLRCEHVFHRDCLNQWVGLRNYTCPLCRDFLGSRRNRVVHDEGRQRHVILFKFSSFSANSERDNWWLR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0420 163 PANTHER - 33 130 - -
Mibi12g0420 163 Pfam Ring finger domain 80 123 IPR001841 -
Mibi12g0420 163 ProSiteProfiles Zinc finger RING-type profile. 81 123 IPR001841 -
Mibi12g0420 163 SUPERFAMILY RING/U-box 80 129 - -
Mibi12g0420 163 SMART ring_2 81 122 IPR001841 -
Mibi12g0420 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 127 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0420 Mibi-ChrMibi12 8986842 8987333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0420 80 128 C3H Transcription Factor Family AT1G15100 61.224 2.74e-15 67.4