Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi12g0419 | ATGACAAGTGTTGCAGTCATAATGAGATTCTCCATTCAACTATTCAGCCTTCTATTCAACTTCCTCAAGCTAGCTTCTCACAATTTCAAACGGGTCGTAGAAATCCTCACCTACTACCCATTTTACAGCCTGCGTGTTCACCACCACCACCACCACCACCACCATCAACTTCTTCATCAAGAATTTCAGATGGTTTCAGAAGAAGAAGAACGAGTCGAAACATGGCAGTCTCGTGAAGGAGGAGCAGGAGAAGAAATAGATTGTGCAGTGTGTCTGCACAAGATTGGTGAAGGAGAAGAAGTTAGAGTGTTGAGATGTGAACATGTTTTTCATAGAAATTGTTTGAATCAATGGGTTAGCCTCAGGTATTTTACTTGTCCTCTTTGCAGGGACTTTATGGGTTCTGGGATTAGGTCTGTTTTAAATGATGTGGGAGGAACAAGAGATGTGATTTTCTATAGATTTTCTGATACTGATCATCATCAGCGTGAGAACTGGTGGCTTCGCTAA | 510 | 0.4176 | MTSVAVIMRFSIQLFSLLFNFLKLASHNFKRVVEILTYYPFYSLRVHHHHHHHHHQLLHQEFQMVSEEEERVETWQSREGGAGEEIDCAVCLHKIGEGEEVRVLRCEHVFHRNCLNQWVSLRYFTCPLCRDFMGSGIRSVLNDVGGTRDVIFYRFSDTDHHQRENWWLR | 169 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi12g0419 | 169 | Pfam | Ring finger domain | 87 | 130 | IPR001841 | - | |
| Mibi12g0419 | 169 | PANTHER | - | 22 | 131 | - | - | |
| Mibi12g0419 | 169 | SMART | ring_2 | 88 | 129 | IPR001841 | - | |
| Mibi12g0419 | 169 | SUPERFAMILY | RING/U-box | 87 | 133 | - | - | |
| Mibi12g0419 | 169 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 45 | 134 | IPR013083 | - | |
| Mibi12g0419 | 169 | ProSiteProfiles | Zinc finger RING-type profile. | 88 | 130 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi12g0419 | Mibi-ChrMibi12 | 8965445 | 8965954 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi12g0419 | 87 | 135 | C3H Transcription Factor Family | AT1G15100 | 59.184 | 2.41e-14 | 65.1 |