Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0414 ATGTCGGTGGCTTCACCGTCTCCGGCGGTTTCCGCCGCCGCACCACCACCACCGACAACCTCCACCAATAATAGTGCTCTGCCGCCACAATCCACCTCGCCGCAGCCTTCTTCTTCGGCACCTCCGCCATCACCGACTTCTTCTCCACCTCCGGCGACTCCGTCGGCACCTCCTCCCGCCGTAACGTCGCCTCCGCCGGCACAATCACCGCCACCTCGGACACCACCACCGCCTCCTCCGTCAGTTACTCAGAGTCCACCGCCATTGTTTCCTCCTCGACAATCGGTTGCACCGGCGTCACAACCGCCGCCGCCTCCGCCTAATTCTCCTCCGCCGCCACGGCAATCACCGGCTCCACCACCGGTGAATTCTCCTCCACCAAATTCTACCCCACCACCGCGGCGATCGCCGGCTCCACCAGTGAATTCTCCTCCGCCATCAAATTCGTCTCAACCGCCGCCTTCGAACCAATCCCCGGCGCCATCGCCGCCTACACCATCGGCGAATCCGCCAAGAATCTCACCTCCACCGCCACCATCAAACCCTCCGAAAACCTCCCCTTCGCCGCCACCGTCGTCAAGCCCTCCGAAATCCTCGCCTCCGCCGCCACCGACATCAAGGCCGCCGGGGAATTCGTCTTCGCCGCCGCCGCCACTGGCAGCATCGGCACCACCGCCTGTAGATTTACCTGCGCCTCGGATGAGTCCCCCTAGTTCAAATTCTACACCAAACTCGTCCCCACCGCCGCCACCTGTAATTCGAATGGCTCCACCTCCGTCCTCACTTATGTCACCACCAGCTTCTCAAAATGCATCGCCACCATCAGCAAGTCAAACAGAGAGTTCAAACGCCAATACAAATAATGGCATTGGTATTGGTGCTGTTGTGGCTATTAGTCTAGCAGGGGGGATTATAGTGCTTGCCTTAATTGGGATTCTTGCTTGGTGTATAATAAGGAGGCAAAAGAAAAAGGGACCTGAGAGTGGTAGTTATGTCATGCCATCCACTTCTGGTTCACTACCCGAGTCAGATTCATCCTTTTTTAAGACACATTCTTCAGCTCCCCTTATACAAAGTGGTTCTGGTAGTGACACTGTGTACACACCGTCTGAGCCGGGTGGATTAGGCAACTCAAGGACATGGTTCACATATGAAGAACTAGTTAAAGCAACTAATAATTTTGCTCCTCAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGATGCTTACCAGATGAGAGAGAGATAGCAGTCAAACAGCTGAAAATTGGTGGAGGTCAGGGTGAAAGGGAATTCAAAGCTGAAGTGGAGATTATTAGTCGCATTCATCATCGTCATTTAGTCTCATTGGTGGGATACTGCGTTTTAGACGATAGAAGGCTGCTCGTCTATGATTATGTCCCCAACAAAACCCTCTATCATCATCTTCATGGAGAAGGTATGCCTGTCTTGAGCTGGGAAAGACGTGTGAAGATTGCTGCTGGTGCAGCTCGAGGAATTGCCTATCTCCATGAAGATTGCAATCCTCGGATCATTCACAGGGATATCAAGTCCTCGAACATTCTTTTAGATTACAACTTTGATGCCCAAGTCTCAGATTTTGGGCTAGCTAAATTAACCCTTGATACAGTTTCACACATAAGCACTCGTGTCATGGGAACATTTGGATATGTTGCACCTGAATATGCATCAAGTGGCAGATTGACTGACAAATCCGATGTATTCTCTTTTGGGGTTGTACTTCTGGAGCTCATTACTGGACGGAAGCCTGTAGATGCATCTCAACCCATGGGCGATGAGAGCCTAGTTGAATGGGCTCGACCTCTACTTAGTCATGCAATTGATAATGAGGAATTTGAAGGTTTAACAGATCCTAAGCTTGAAAGGAACTATGTTGAAAGTGAGATGTTTCTCATGATTGAAATTGCTGCAACTTGTGTTCGACATTCGGCTGCCAAGAGACCTCGAATGGGACAGGTTGTTAGAGCTTTTGATAGCATAATAAATTCAGATTTAAACAACGGGATGAGGCCAGGGGAAAGCGAGGCATTTAACTCTGCACAGCAGTCTGCAGAAATAAGAATGTTTCGTAGGATGGCATTTGGTAGCCAAGATTACAGCACAGACTTTTTTAGCCAGACAAGTTTCAATTCAAAATAG 2169 0.5021 MSVASPSPAVSAAAPPPPTTSTNNSALPPQSTSPQPSSSAPPPSPTSSPPPATPSAPPPAVTSPPPAQSPPPRTPPPPPPSVTQSPPPLFPPRQSVAPASQPPPPPPNSPPPPRQSPAPPPVNSPPPNSTPPPRRSPAPPVNSPPPSNSSQPPPSNQSPAPSPPTPSANPPRISPPPPPSNPPKTSPSPPPSSSPPKSSPPPPPTSRPPGNSSSPPPPLAASAPPPVDLPAPRMSPPSSNSTPNSSPPPPPVIRMAPPPSSLMSPPASQNASPPSASQTESSNANTNNGIGIGAVVAISLAGGIIVLALIGILAWCIIRRQKKKGPESGSYVMPSTSGSLPESDSSFFKTHSSAPLIQSGSGSDTVYTPSEPGGLGNSRTWFTYEELVKATNNFAPQNLLGEGGFGSVYKGCLPDEREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCVLDDRRLLVYDYVPNKTLYHHLHGEGMPVLSWERRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFDAQVSDFGLAKLTLDTVSHISTRVMGTFGYVAPEYASSGRLTDKSDVFSFGVVLLELITGRKPVDASQPMGDESLVEWARPLLSHAIDNEEFEGLTDPKLERNYVESEMFLMIEIAATCVRHSAAKRPRMGQVVRAFDSIINSDLNNGMRPGESEAFNSAQQSAEIRMFRRMAFGSQDYSTDFFSQTSFNSK 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0414 722 Pfam Protein kinase domain 397 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0414 722 Gene3D Phosphorylase Kinase; domain 1 371 469 - -
Mibi12g0414 722 MobiDBLite consensus disorder prediction 265 283 - -
Mibi12g0414 722 ProSiteProfiles Protein kinase domain profile. 394 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0414 722 SUPERFAMILY Protein kinase-like (PK-like) 373 665 IPR011009 -
Mibi12g0414 722 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 302 702 - -
Mibi12g0414 722 MobiDBLite consensus disorder prediction 34 264 - -
Mibi12g0414 722 CDD STKc_IRAK 400 670 - -
Mibi12g0414 722 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Mibi12g0414 722 PRINTS Proline rich extensin signature 25 37 - -
Mibi12g0414 722 PRINTS Proline rich extensin signature 64 80 - -
Mibi12g0414 722 PRINTS Proline rich extensin signature 1 17 - -
Mibi12g0414 722 PRINTS Proline rich extensin signature 38 59 - -
Mibi12g0414 722 SMART serkin_6 394 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0414 722 Gene3D Transferase(Phosphotransferase) domain 1 470 689 - -
Mibi12g0414 722 MobiDBLite consensus disorder prediction 1 283 - -
Mibi12g0414 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Mibi12g0414 722 FunFam proline-rich receptor-like protein kinase PERK8 470 681 - -
Mibi12g0414 722 FunFam Proline-rich receptor-like protein kinase PERK8 366 469 - -
Mibi12g0414 722 MobiDBLite consensus disorder prediction 16 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0414 Mibi-ChrMibi12 8833385 8838589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0414 290 721 Trihelix Transcription Factor Family AT5G38560 63.470 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi12g0414 Pkinase 1.1e-42 CL0016