Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0403 ATGATGCCCCCTCATGAGCAAGAAACTACCACAGTTGCTTCTGTGAAGATGATGCCCAACATGCAGATTCAGACCGCCGTGAACCGGCCGGAGAACGGTTCGGTCCATGCCGAGCCCCAAGGTCCGGCCCGCCACACCGGAGAATCCGGCCTAAACACCTCCATTTCCGTCCATGATCACCACCCAACAACACCAAAATTCTCAGCTCTTCATCAATCCTTACGTCCCGTTACCCTCAAATTTGAAGATTTCTCTTATAGTGTAACAATTGAAGCCAAGAAGAATACTTGTGCATGTGCTTCTTCACAAAAACCAAAGATGAACCGGACGATACTCAACGGCGTGACGGGTATCGTCCGGCCCGGCGAGCTCATGGCAATGCTGGGCCCATCGGGCAGCGGTAAGACCACTCTTCTAACGGCCCTCGCGGGCCGGCTAACCGGGAAAGCCTCCGGCTCGATAACATACAATGGGAAACCTTTTTCAAGCTCAATGAAGCGAAAAACCGGCTTTGTCACACAAGATGATGTTCTCTACCCTCACCTTACCGTGTTAGAGACTCTAACTTTTGCTGCCTTGTTAAGGCTTCCAAAAAGTTTGACAAAAAAGGAGAAAATAGAGCAGGCGGAGGCGGTCATGGCGGAGCTAGGGTTGACACGGTGCCGGAACAGCCCGGTCGGAGGCGGGTCGGGTTTGGTCCGGGGGATATCCGGAGGGGAAAGGAAAAGGGTAAGTATTGGGCAAGAGATGCTGGTGGACCCGTGTCTGATGTTGTTGGACGAGCCAACGTCTGGGCTGGACTCGACCACGGCCCAACGGATCATAATGATGCTGAGGGGCCTGGCCCGGGCCGGCCGAACGGTGGTGACGACGATCCATCAGCCGTCTAGCCGGTTGTATAGGATGTTTGATAAGGTGGTTGTGTTATCGGAGGGGTGTCCAATTTACAGTGGGGAAGCGGGTCGGGTCATGGATTATCTTGGATCCGTTGGGTTTGTACCCGCTTTCAACTTTGTTAACCCGGCAGATTTTCTACTTGACTTGGCTAATGGCATAGTAGCTGATGTTAAACAGGATGATCAAACTGATTCACATGGAGCATTATTAGACCAACATGAGGATCAAGCTTCAGTCAAACAGTCCCTAGTTTCATCCTTCAAGAAGATTTTATATCCCTCTCTCAAACAAGAAATTCAGCAAAGTAATAGAGACCTAGCTGCTCTAACATCAGCAACACCAAGAAGTTCAAAGAATCAATGGAACACAAGCTGGTGGGAGCAGTTCAGGGTGCTTCTGCAAAGAGGTTTAAAAGAAAGGAGACATGAATCATATTCAGGCTTAAGGATTTTCCAAGTCCTGTCTGTCTCTATTCTCTCTGGACTGCTTTGGTGGCATTCTGATCCCTCCAACATACAAGATCAGGTAGGCCTGCTCTTCTTCTTCTCAATCTTCTGGGGATTCTTCCCACTGTTCAATGCAATATTAGCATTCCCTTTAGAGAGACCAATGCTATCAAAAGAGAGATCATCAGGAATGTACCATCTCTCCTCTTACTACATGGCAAGAATGATCGGAGACTTACCAATGGAGCTAGTTCTTCCAACTATCTTCCTAACCATCACATATTGGATGGGAGGCCTCAAGCCTTCAATTGTCACATTTGTGTTAACCCTTTTGATCATCCTCTTCAATGTCCTTGTGTCCCAAGGCATAGGCCTTGCCCTTGGGGCAATCCTAATGGATGTGAAGCAAGCCACAACTTTAGCTTCTGTGACCATGCTAGTGTTTTTGTTAGCTGGTGGCTATTATATTCAGAAGATGCCTTCTTTCATAGCTTGGCTTAAATACTTCTCTTTTAGTCACTATTGTTATGAGCTTTTGGTGGGAGTTCAGTATTCAGAAGACCAAGTTTATGACTGTGGCCATGGGATGCATTGTAGGGTGGTGGATTTTCCTGCCATTAAGTGTTTGGATATTGGGAATTTGTGGGGTGATGTGGCTGCTATGGTTGTTATGTTTACTGGATATAGAATTGTGGCTTATTTAGCTTTGAGGATGAGGCAGCCTATCTGA 2073 0.4766 MMPPHEQETTTVASVKMMPNMQIQTAVNRPENGSVHAEPQGPARHTGESGLNTSISVHDHHPTTPKFSALHQSLRPVTLKFEDFSYSVTIEAKKNTCACASSQKPKMNRTILNGVTGIVRPGELMAMLGPSGSGKTTLLTALAGRLTGKASGSITYNGKPFSSSMKRKTGFVTQDDVLYPHLTVLETLTFAALLRLPKSLTKKEKIEQAEAVMAELGLTRCRNSPVGGGSGLVRGISGGERKRVSIGQEMLVDPCLMLLDEPTSGLDSTTAQRIIMMLRGLARAGRTVVTTIHQPSSRLYRMFDKVVVLSEGCPIYSGEAGRVMDYLGSVGFVPAFNFVNPADFLLDLANGIVADVKQDDQTDSHGALLDQHEDQASVKQSLVSSFKKILYPSLKQEIQQSNRDLAALTSATPRSSKNQWNTSWWEQFRVLLQRGLKERRHESYSGLRIFQVLSVSILSGLLWWHSDPSNIQDQVGLLFFFSIFWGFFPLFNAILAFPLERPMLSKERSSGMYHLSSYYMARMIGDLPMELVLPTIFLTITYWMGGLKPSIVTFVLTLLIILFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYELLVGVQYSEDQVYDCGHGMHCRVVDFPAIKCLDIGNLWGDVAAMVVMFTGYRIVAYLALRMRQPI 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0403 690 Pfam ABC transporter 112 264 IPR003439 GO:0005524
Mibi12g0403 690 FunFam ABC transporter G family member 22 99 330 - -
Mibi12g0403 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 328 IPR027417 -
Mibi12g0403 690 Gene3D - 98 329 IPR027417 -
Mibi12g0403 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 336 IPR003439 GO:0005524
Mibi12g0403 690 MobiDBLite consensus disorder prediction 46 64 - -
Mibi12g0403 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 43 681 - -
Mibi12g0403 690 MobiDBLite consensus disorder prediction 30 64 - -
Mibi12g0403 690 SMART AAA_5 121 313 IPR003593 -
Mibi12g0403 690 Pfam ABC-2 type transporter 426 632 IPR013525 GO:0016020|GO:0140359
Mibi12g0403 690 ProSitePatterns ABC transporters family signature. 236 250 IPR017871 GO:0005524|GO:0016887
Mibi12g0403 690 Pfam ABC-2 type transporter 293 359 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0403 Mibi-ChrMibi12 8647632 8652317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0403 59 312 Calmodulin-binding Proteins AT2G36910 28.839 2.20e-14 75.5