Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0391 ATGAAAATAGAGGAAGATCACCAAGGACAGTGTTCATCGTCTTCTTCTTATCACCAAGCGATCAATAACAACAACATCCACACCTTTCAAGAACAGCTTCTCCTTCACCAAATGATGCAACAAAACGTGGACGTTATTGGAGGTAACAATCCTTCTAACAACAACAGCAACAACTTCCAAAGTAGAGAATTGATGTTCCCTGAAATATCTCCAAACTTTCTTCCTCCACCTTTACCACAGCCGCCATGGCCTCTCCCTCCGGTTCCGGTCCCACATAGCGACCAATTTTTGGGACTGTTCAATAACCGGAGGGTTATAAATCCTTCTCTACAATTTGGTAATAGTAGTAATTATGATGGTTCCTCCAATAATAACTCGGATCGTCTTCGGATCTTATCCGAGACGCTCCGGGTCGGACCGGTCGTGATGGGCCAACCCGGCTCATCGTCATCAGCTCCCTTTGGCCTCCAAGCCGAGCTGGTGGGGAAGATGACGGCTCAGGAAATCATGGATGCTAAAGCCCTCGCTGCTTCAAAAAGCCATAGTGAAGCTGAAAGAAGACGCCGAGAGAGAATCAATAATCATCTAGCCAAGCTTCGAAGCTTATTGCCCAATACAACTAAAACAGATAAAGCTTCGTTATTAGCAGAAGTAATCCAGCATGTGAAGGAGCTAAAGCGTCAAACTTCAATAATAGCAGAAACAAGCCCGGTGCCAACGGAAACCGACGAGCTCACTGTGGATGACGCCTCTGATGAGGATGGAAAGTTCGTAATCAAAGCTTCACTTTGTTGCGAAGATAGGTCCGATCTCTTGCCGGACCTCATCAAGACATTGAAAGCCCTAAGGTTGAAAACCGTCAAGGCTGAGATCACCACTGTTGGCACTCGCGTTAAGAACGTCTTGTTCGTCACTGGAGAAGAAGACGAGTCCAGTGGCGGAGGTGGCGGTGAGGAGAATCATCAGCAATGTATAAGTTCTGTACAAGAGGCATTGAAGGCAGTGATGGAGAAAAATGGAGGTGGTGGGGGTGATGAGAATAATAATGGGAATGTTAAGAGGCAAAGAACTAATAATAATATCAATATCCTTGAACAAAACAGGTCTTTATGA 1113 0.4546 MKIEEDHQGQCSSSSSYHQAINNNNIHTFQEQLLLHQMMQQNVDVIGGNNPSNNNSNNFQSRELMFPEISPNFLPPPLPQPPWPLPPVPVPHSDQFLGLFNNRRVINPSLQFGNSSNYDGSSNNNSDRLRILSETLRVGPVVMGQPGSSSSAPFGLQAELVGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSIIAETSPVPTETDELTVDDASDEDGKFVIKASLCCEDRSDLLPDLIKTLKALRLKTVKAEITTVGTRVKNVLFVTGEEDESSGGGGGEENHQQCISSVQEALKAVMEKNGGGGGDENNNGNVKRQRTNNNINILEQNRSL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0391 370 PANTHER TRANSCRIPTION FACTOR BHLH30 123 363 IPR045847 GO:0003700|GO:0006355
Mibi12g0391 370 CDD bHLH_AtAIG1_like 171 248 - -
Mibi12g0391 370 SMART finulus 182 231 IPR011598 GO:0046983
Mibi12g0391 370 MobiDBLite consensus disorder prediction 344 370 - -
Mibi12g0391 370 FunFam transcription factor bHLH30 171 234 - -
Mibi12g0391 370 Pfam Helix-loop-helix DNA-binding domain 179 225 IPR011598 GO:0046983
Mibi12g0391 370 Gene3D - 171 232 IPR036638 GO:0046983
Mibi12g0391 370 MobiDBLite consensus disorder prediction 335 370 - -
Mibi12g0391 370 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 232 IPR036638 GO:0046983
Mibi12g0391 370 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 225 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0391 Mibi-ChrMibi12 8297941 8300841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0391 24 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 55.496 1.29e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g0391 HLH 2.6e-12 No_clan