Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0388 ATGGCTACTGTCACTACAGCTCGAGGAATTGGCGTAGGAGCCACAGAGCTTCATCAAATACCCCATCATCCTATTCCCTCCAATCACACCAACAAATCTCTCTTTTTAGGTCAAAACCTTCGAAAAAAGCCCTCATTCACAGAATCCCAATTCAGTGGAAGAATCACCACCTTCTCAAACCCTAAATCATTCGTAACCTGTGCTTTAGGAGGAGAATGGCTCGATTCGATTCAGCACTTATTTTTGGGCGTTGGTGTTGGCCTTCCTTGTACGGTCATGGAGTGTGGCGATATAATTTACAGAAGCACTCTTCCGAAGTCTAATGGCCTTACGATTACAACCCCTGGAGTTGTTTTGGCTCTCGGTGCTGTTTCCTACCTCTGGGCTACTCCTGGTGTCGCTCCTGGTTTCTTTGACATGTTTGTTCTTGCCTTTGTTGAAAGATTGTTCAGACCTACTTTTAGAAAGGATGACTTTGTCCTGGGGAAGAAGTTGGGCGAGGGATCCTTTGGTGTAGTTTATAGAGTTTCATTGGCTAAGAAGCCCTCTTCAAAGGAAGGTGACTTGGTCTTGAAGAAGGCTACTGAATATGGCGCGGTAGAAATTTGGATGAATGATCGTGTTAGGAGAGCTTGTGCAAACAGCTGTGCTGATTATGTTTATGGTTTCCTTGAGAGTTCTGGGAAGAAGAGCGGTGAATATTGGCTTATATGGAAATTTGAAGGGGATGCCACACTAGCAGACCTTATGCAGAGTAAAGAGTTCCCATACAATGTTGAAACCATGATTCTGGGCAAGGCCCAGGACTTGCCTAAGGGATTGGAAAGAGAGAACAGAATAATTCAAACAATCATGAGGCAGATCTTGTTTGCATTGGACGGTCTTCACTCGACTGGAATCGTGCATAGGGATATTAAGCCCCAGAATATTATTTTCTCTGAAGAATCTCGCACATTCAAGATTATTGATCTTGGAGCTGCAGCAGATTTGCGGGTTGGCATCAACTATATTCCTAATGAGTTTCTTTTGGATCCAAGATACGCTGCCCCAGAGCAGTATATCATGAGCACACAAACCCCCTCGGCACCCTCAGCGCCGGTTGCAACTGCACTTTCCCCAGTCCTATGGCAGTTGAATCTACCGGACAGATTTGATATCTATAGTGCTGGCCTAATATTTCTCCAAATGGCAATCCCTGGATTACGCTCCGATAATTGCCTCATTCAATTTAACCGTCAGTTGAAGAGGTGTGACTATGACTTGGTTGCATGGAGAAAAAGTGTAGAAAATCGGTGTGGCCCTGAACTAAGGAGGGGCTTTGAGCTTCTGGAGTTAGATGGTGGAGTAGGATGGGAACTTCTGACATCAATGGTCCGCTACAAAGCAAGGCAACGACTCAGTGCAAAAGCTGCATTAGCTCATCCCTACTTTGACAGGGAAGGCTTGTTGGCACTATCTTTCATGCAAAATCTAAGACTGCAGCTCTTACGGGCAACACAGCAGGATTATGGAGAAGCAGCCAAATGGATTATTCAGCTCATGGCAAAATCTGGAACCTCAGAAGTTGGAGGATTTACTGAAGCTCAGCTCCAGGAACTAAGAAATATTGAACCAAAGAAGAAGAATAGTGCACAAAGAAATGCTTTAGCCTCAGCTCTCAAACTTCAGAGGAAAATCATAAAGACATTGAATGAGAGTGTGGATGAGCTTACTCGAGGCAGGAAAAGCCTTTGGTGGAGCAGATGGATCCCCAGGGAAGAATGA 1764 0.4484 MATVTTARGIGVGATELHQIPHHPIPSNHTNKSLFLGQNLRKKPSFTESQFSGRITTFSNPKSFVTCALGGEWLDSIQHLFLGVGVGLPCTVMECGDIIYRSTLPKSNGLTITTPGVVLALGAVSYLWATPGVAPGFFDMFVLAFVERLFRPTFRKDDFVLGKKLGEGSFGVVYRVSLAKKPSSKEGDLVLKKATEYGAVEIWMNDRVRRACANSCADYVYGFLESSGKKSGEYWLIWKFEGDATLADLMQSKEFPYNVETMILGKAQDLPKGLERENRIIQTIMRQILFALDGLHSTGIVHRDIKPQNIIFSEESRTFKIIDLGAAADLRVGINYIPNEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAIPGLRSDNCLIQFNRQLKRCDYDLVAWRKSVENRCGPELRRGFELLELDGGVGWELLTSMVRYKARQRLSAKAALAHPYFDREGLLALSFMQNLRLQLLRATQQDYGEAAKWIIQLMAKSGTSEVGGFTEAQLQELRNIEPKKKNSAQRNALASALKLQRKIIKTLNESVDELTRGRKSLWWSRWIPREE 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0388 587 Gene3D Transferase(Phosphotransferase) domain 1 264 481 - -
Mibi12g0388 587 ProSiteProfiles Protein kinase domain profile. 159 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0388 587 Pfam Protein kinase domain 161 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0388 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Mibi12g0388 587 SUPERFAMILY Protein kinase-like (PK-like) 144 479 IPR011009 -
Mibi12g0388 587 Gene3D Phosphorylase Kinase; domain 1 146 239 - -
Mibi12g0388 587 SMART serkin_6 159 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0388 587 ProSitePatterns Protein kinases ATP-binding region signature. 165 192 IPR017441 GO:0005524
Mibi12g0388 587 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 73 562 - -
Mibi12g0388 587 CDD STKc_SNT7_plant 163 477 - -
Mibi12g0388 587 FunFam Serine/threonine-protein kinase STN7, chloroplastic 268 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0388 Mibi-ChrMibi12 8135417 8140587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0388 277 478 Core Cell Cycle Gene Families AT2G38620 30.516 6.03e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Mibi12g0388 Pkinase 2.8e-19 CL0016