Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0382 ATGCAGAGCGATGAGTACTCTAATTTCTCCTACTTCTCTTCTTCATCATGTCTACATGAACCACAACAACACCAACATCATCATCAACTACTTCTTGACGAACAAGAACTCTCCATTTCCCTCTCTCTTGGCCCTCCTGGCCAACATTCCCATAAGGTTAACTCCACTGTTACTACCACTTCTCCTTCTCCCAACGACATCGTTTCTCTACATAATCACCATCACCACCATCTTCTTCACCACCACCACAAAAACCCTAACTCATCCGATCTCGGCGTCACCGTCGCTCTTCATATAGGTCTCCCTCCTCCTCCCACCACCACCACCACTAATAGTAGTGGTGGTGGTTCTGGAAATAAACCTGACCCGTTAATGAGTTCAATGTGTAATTCGGGTCATGTTCCGGGTCAGTATTGGATTCCTTCTCCTGCCCAGATCCTCATAGGGCCCACCCAATTCTCTTGCTCTGTCTGCAACAAAACCTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGATCACAGTATAGGAAAGGGCCAGAATCACTTAGGGGAGCAAAACCAGCTTCATCAATTCTGAGGTTGCCATGTTATTGTTGTGCGGAAGGTTGTAGGAACAACATACAACATCCGAGGTCAAGGCCATTGAAGGATTTCAGGACACTTCAGACACATTACAAGAGGAAGCATGGGGCGAAGCCTTTCGGCTGCAGGAAGTGCGGGAAGGCGTTTGCAGTCAGAGGAGACTGGAGGACCCATGAGAAGAATTGTGGTAAACTTTGGTTTTGTATTTGTGGCTCTGATTTCAAGCACAAGAGATCTCTTAAAGACCATGTTAGGGCCTTTGGTGATGGCCATGCTCCTCACACAGTTGATGGAAGCCGAGGTGGTAGTAATGATCACCACCACCAACACCAAGAAGAAGATGTTGAGGATGAGGAGGAAGATGATGAATTAGAAGAAGATGATGATGATAATAACAGTGATGTGTTTGTCTACAATGGAAATCATGCCTCCGTTTACTTCTGA 1038 0.4615 MQSDEYSNFSYFSSSSCLHEPQQHQHHHQLLLDEQELSISLSLGPPGQHSHKVNSTVTTTSPSPNDIVSLHNHHHHHLLHHHHKNPNSSDLGVTVALHIGLPPPPTTTTTNSSGGGSGNKPDPLMSSMCNSGHVPGQYWIPSPAQILIGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSILRLPCYCCAEGCRNNIQHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKAFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVDGSRGGSNDHHHQHQEEDVEDEEEDDELEEDDDDNNSDVFVYNGNHASVYF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0382 345 FunFam Zinc finger protein WIP2 207 289 - -
Mibi12g0382 345 ProSitePatterns Zinc finger C2H2 type domain signature. 155 175 IPR013087 -
Mibi12g0382 345 MobiDBLite consensus disorder prediction 103 126 - -
Mibi12g0382 345 MobiDBLite consensus disorder prediction 287 345 - -
Mibi12g0382 345 SUPERFAMILY beta-beta-alpha zinc fingers 144 175 IPR036236 -
Mibi12g0382 345 MobiDBLite consensus disorder prediction 312 331 - -
Mibi12g0382 345 PANTHER ZINC FINGER PROTEIN WIP2 28 320 IPR043584 GO:0003700|GO:0010468
Mibi12g0382 345 MobiDBLite consensus disorder prediction 101 126 - -
Mibi12g0382 345 Gene3D Classic Zinc Finger 152 175 - -
Mibi12g0382 345 Gene3D Classic Zinc Finger 196 285 - -
Mibi12g0382 345 ProSiteProfiles Zinc finger C2H2 type domain profile. 153 180 IPR013087 -
Mibi12g0382 345 SMART c2h2final6 238 258 IPR013087 -
Mibi12g0382 345 SMART c2h2final6 201 233 IPR013087 -
Mibi12g0382 345 SMART c2h2final6 153 175 IPR013087 -
Mibi12g0382 345 ProSiteProfiles Zinc finger C2H2 type domain profile. 238 258 IPR013087 -
Mibi12g0382 345 SUPERFAMILY beta-beta-alpha zinc fingers 221 258 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0382 Mibi-ChrMibi12 7983239 7984702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0382 26 294 C2H2 Transcription Factor Family AT1G13290 67.037 6.38e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi12g0382 None None None