Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0381 ATGCAGCCTCAGAAAATGGGGTTTCGAGAATACGTCGAAGCCTTAGAAGAAGAACGCCTCAAAATTCAGGTCTTCTCCAAGGAACTTCCCCTTTCACTTGAGCTTGTCTCACAAGCCATTGATGCTTATAGGCAACAACTTTCTGGTAGCACGGAGTACAATGTTGTTGTTCATGGACAATCGGATTGTTCAGAGCAGACATCCATGGAAGAAGGCCCTGTTCTTGAAGAGTTTATCCCCATCAAGAAAAGAGATTCCCCTGATTGTGACTACGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGATGAACAACATTCGCATAAGCACAAGATCCTTAAGGATAACAACAACAATAAGATCAACTCTGATAAGAGAAAATCAGACTGGCTCAGATCTGTTCAGCTCTGGAACCCAGATCCCACAACCAAAGAGGATTTGCCTAGAAAAACTACGGTGGTGGAAGTGAAGAGGAATGGTAATGGAGGTGCCTTTCACCCATTTCACAGAGAAGACAACATCAGCAACAACAATAACAATAATAATGTTGGGAAGACCAACAGTAACAGTAACATGACGGCTGTTAAATCTGTGTCTCCGGCGCCGGTGCCGGCGATGAGCTCAAGCGCCGGCGGCGGAGGCGGAGGAAGCAAGAGGTCGGAGGAGAAAGAAGGGCAGGGTTCGAGGAAGCAACGGCGGTGCTGGTCGCCGGAATTACACAAACGCTTCTTACAAGCCCTTCAACAACTTGGAGGTCCAGATTCTGCAACTCCAAAGCAGATCAGAGAGCTCATGAAGGTTGATGGCCTCACTAACGATGAAGTCAAAAGCCACTTGCAGAAATTTCGGTTGCACACAAGAAGGCCAAGTGCTCCTATGATTCACAACAATGCAACTTCACAAACAGCTCCTTTTGTTCTTGTTGGTAACATATTTGTGCAACCACCTGAATACGCTGCGGCTGTGGCGACTTCCACGGCATCGGGTGAGGTCACTACGGTGACCACTCCGACCGGAATTTATGCGCCGGTGGCGGCTCATCCTCCGATGCCGGTGCAGCCTAAGAAGGCGGTGCAGGTGAAGCAATTGGAGCAGTCACATTCTATGGATGAGGAAAGGGGGAATCATGGTAGTGAAGGGGCTGTTCATTCAAATTCTTCTCCTGATTCATCATCTTCCACACACAGCACCTCTCATTCTCATGGGTATTGA 1209 0.4781 MQPQKMGFREYVEALEEERLKIQVFSKELPLSLELVSQAIDAYRQQLSGSTEYNVVVHGQSDCSEQTSMEEGPVLEEFIPIKKRDSPDCDYEEEEEEEDEEDEQHSHKHKILKDNNNNKINSDKRKSDWLRSVQLWNPDPTTKEDLPRKTTVVEVKRNGNGGAFHPFHREDNISNNNNNNNVGKTNSNSNMTAVKSVSPAPVPAMSSSAGGGGGGSKRSEEKEGQGSRKQRRCWSPELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRPSAPMIHNNATSQTAPFVLVGNIFVQPPEYAAAVATSTASGEVTTVTTPTGIYAPVAAHPPMPVQPKKAVQVKQLEQSHSMDEERGNHGSEGAVHSNSSPDSSSSTHSTSHSHGY 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0381 402 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 229 284 IPR006447 GO:0003677
Mibi12g0381 402 MobiDBLite consensus disorder prediction 81 125 - -
Mibi12g0381 402 MobiDBLite consensus disorder prediction 378 402 - -
Mibi12g0381 402 MobiDBLite consensus disorder prediction 216 235 - -
Mibi12g0381 402 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 366 IPR044787 GO:0003700|GO:0006355
Mibi12g0381 402 Gene3D - 228 286 - -
Mibi12g0381 402 MobiDBLite consensus disorder prediction 353 402 - -
Mibi12g0381 402 MobiDBLite consensus disorder prediction 158 235 - -
Mibi12g0381 402 SUPERFAMILY Homeodomain-like 227 287 IPR009057 -
Mibi12g0381 402 MobiDBLite consensus disorder prediction 102 125 - -
Mibi12g0381 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 226 286 IPR017930 -
Mibi12g0381 402 FunFam Myb family transcription factor 228 286 - -
Mibi12g0381 402 MobiDBLite consensus disorder prediction 170 196 - -
Mibi12g0381 402 Pfam Myb-like DNA-binding domain 231 280 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0381 Mibi-ChrMibi12 7960576 7962582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0381 10 345 G2-like Transcription Factor Family AT1G68670 49.008 6.48e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi12g0381 Myb_DNA-binding 2.1e-06 CL0123