Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0378 ATGGCAATTGTTATGTCTCATTCTGCCCTCAACTTCCATACCACCTCACCCTCGCCGGGGACGACGTCTCCGGTGATCGTCGCCTTCACCGTCGGCGTCCTCATTTGCTTCGTCGCCGGCTTCTGCTGCATCTACATTTGCCGTTGTTGCTTCATGAATCACCTCTACGCCTGGATCTTCAACCGCCCCGGCGACCACTTCCGCCGCCATATCAATTCCCCCGCCACCGCCACGGCCTCCGGCGCCGGCGCCGGCGACTCCGTCCCTCCGATCCGAGGCCTCGATCCGACTCTGCTTCAAAATTTCCCTGTCTTCACTTACTTGTCCGTCAAGGAATCTCAGGGGAAGAACAACATTAATAGCAAGAAATATGACCTTGAATGTGCGATTTGTTTGCTTGAATTCGAGGAAGATAGTTTGTTACGGTTATTAACGGTTTGTCGCCATGTTTTTCACCAAGAATGTATCGATCTCTGGCTTGAATCTCACAAAACATGCCCTGTTTGTCGTACGGATCTGGATTCTTCGTCCAAGGGAATGAAATTCACATCGGATCATCGAAATGGGATAAGAATGGAAGAGAATAATCCCGACGATTACAACGAAAATGAGACACGTATCGATGTGAGGGAAGATGAAGAAGAAGAAGAAGAAGAGGTTGTTTCAGAGAAGAGATTTATAAGATCACATTCAACGGGTCATTCTATAGTTATGATGAAAGAAAGAGGAGGAAGAAGTAGCAGTAATAACAATGGTGATGATTGTGGTGATGAGAAGGAGAATGAAGATAAGTATACTTTGAAATTACCAGAACATGTTGAGATGAAATTGGTAAGAGGACATATTATGGCATCAAAAAGTTGTTCATCCTACGGAGAAATAACCAGAATTTGTAATAAATGTTACTATGCTGAGGCTATATCAGGTTCAAGTAAATCTAATACTTCCTGA 951 0.4501 MAIVMSHSALNFHTTSPSPGTTSPVIVAFTVGVLICFVAGFCCIYICRCCFMNHLYAWIFNRPGDHFRRHINSPATATASGAGAGDSVPPIRGLDPTLLQNFPVFTYLSVKESQGKNNINSKKYDLECAICLLEFEEDSLLRLLTVCRHVFHQECIDLWLESHKTCPVCRTDLDSSSKGMKFTSDHRNGIRMEENNPDDYNENETRIDVREDEEEEEEEVVSEKRFIRSHSTGHSIVMMKERGGRSSSNNNGDDCGDEKENEDKYTLKLPEHVEMKLVRGHIMASKSCSSYGEITRICNKCYYAEAISGSSKSNTS 316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0378 316 MobiDBLite consensus disorder prediction 180 202 - -
Mibi12g0378 316 FunFam E3 ubiquitin-protein ligase ATL6 86 176 - -
Mibi12g0378 316 SUPERFAMILY RING/U-box 105 175 - -
Mibi12g0378 316 CDD RING-H2_EL5_like 127 170 - -
Mibi12g0378 316 Pfam Ring finger domain 127 170 IPR001841 -
Mibi12g0378 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 176 IPR013083 -
Mibi12g0378 316 SMART ring_2 128 169 IPR001841 -
Mibi12g0378 316 MobiDBLite consensus disorder prediction 239 261 - -
Mibi12g0378 316 PANTHER RING FINGER DOMAIN-CONTAINING 21 178 - -
Mibi12g0378 316 ProSiteProfiles Zinc finger RING-type profile. 128 170 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi12g0378 Mibi-ChrMibi12 7823957 7824907 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0378 15 246 C3H Transcription Factor Family AT2G35420 34.188 2.20e-32 119