Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0361 ATGGCTTCCGATCCACATGGCTCTCGTCGCAACAAGCATCGCCGATCATCTTCCCCCGAAGAAGTCGAGCGATCCTCCAAGCGTCATAAGCACCGCCACCATGGTCAGCGCCATCATCGTCACCGCCATGGGAGCAAGAAACGCGAGGAAGAGCTTGAAATCAATGCTGAAACTGTTGATAAGGTTCCTTCTCCAAATCTTGATCTTAATTCTGATCCTAAGATCCCTAGGTTTGATGATGTTGATGATGATGTTGAGGAGGGTGAGATTCTTGAAGAAGATGGTGAGATAGGGAAAAAGCATGCGGAGTCCGATGCGGAGTCTGGTGAAATTATGGCCGCAGGAGATCGAGGTATTCGATCTGATGACTCGAATCCGGTACATTTCACTGAAGAGGTTTTACATCGGAAAGATGCCATTCATTCTAAAGAGACAGTAGGAATTAATGCTAAAGCTTCAGAAACTAATAATGAGAAAATCAGCAATGGTAGATTTATTAGTCCAGGATTGGATGGAGAATATGATACTCGCCATCAGAGACACACTGGTAGTAGGAAAAATGGAGTTGATGTTTGTCCTACTCATTCAAGTGCTGAGTCTCTTGATGGTAAGCATGCTAGAGCCAGTTCAGATGCTTTGGGCAATGGGTATTTGGATGGTAAGTCTTCCAAAGAGGATAAATGGCAGCATGGGGAGCTTGGATGTTCTAAAGGAAATGAGAAGCTGAAAGGTGACTACGATGATGAAGATCTGGAAGTTAATGGAGGCAAAGTAACCATTCATAGAAAGAACTCCTCCCCTGAAAGTGGAGGTGGCAAATATAGGACCAGGGAAAGCTCACCTAATTACAGATGTAGGAGTCGATCCAGATCAAGTGGTCATACTCATAAGGTAGTAGAAGAATATGCTCATTCCAGGAGAAGGTATGATGATGAAAGAATTGGGGAGTATGGCAGGGAGCGTGAACATGTTAGTAGAGATTTGATGACAGGTGATAGAAGGGAGCGTAGTTCCAGTTATTACAGTCGGGAGGCCCGGGATAGAGGTAGGAGCAAGGACAGAGATGGGGATAGGGACTTAAGAAGGGAAAAGGAACGAGAAAGGAGCCGGAATAGAGAGGATGAGCGTGTGCATAGGAGGGGAAAAGAACGTGAAAGGAGCCATGAGAAGGATAGAAGGGATGCTGAAAAAGATAGGAGCAGGGGAAGAGAGGTGGACAGGGATAGAAGAATAGAAAAGGAGCGAGATAGAGATAGGAGCTGGGATACAGTTGCTGAGCGGGGTAGAAGTGATAGGGGAAGAGAGAGGAGCAGGGACAGAGCTAGGATTGGAGAGCGAGATAGAGTCTGGGAGAGCGAAAGGGATGATAAGTATCGAGAAAGAGATAAGATTAGGGAGAGAGAAAGGCATAAGGATAGAAACACTCTCGATAAAGATAAATATCTGGGTTATGAGCATGGTAATGATAGCCGGGACAGAGATATACGCTCTAGGCATTCAAGACATGAAGAGGCAGAAAGCCATCGGGAGAGAACAAGAAATTCTGAGTCTGTGAAAGTTGATAACCGTATGGACAGAGGTGAGGATGAACAGGATGACTTAGACGAGACAGCCACGTTGCAATTTGCTGAACAAGAAGAGGAAGATCTTAACAGAATTAAGGAGGAGAGTAGGAGGAGGAGGGAAGCAATCTTAGAGAAATATAAAAAGCAGCAACCACAGCAGCATCAACAAGCAGAAGAAACTTCTGAAAGTAGAGAAAAAGATAAGGATCCTGTGAATATTCCAGCTCCAATTCCTGAAGCTCCTGATGCTAAGAATGATGGTGTTGATGTTTTTGAAGTGGAACCATCTTTCACTGTTGATAAATCTCCTCGAGAAAATGGGAATGATGCGTCTGAGAAGATCCCTGGTGTTGCTCGGGGCTTGGGAGAGGGCACTCCAAAGAGTGAAAGATCCGATGACAAATTCTGTGATGACATATTTGGTGAGACACCAACAGGAGTTCGCAAAATGGGCAAAGGGGATGGGTTGCGCGTTGACAGGGGTGGATTGCATGATAATTGGGATGATGCAGAGGGATATTATAGCTATCGTTTTGGTGAGATACTGGATGGTCGATATGAAGTTATAGCAGCTCATGGTAGAGGTGTCTTTTCAACAGTTGTTCGTGCAAGGAATCTCAAGGCTGGTAATGGTGAGCCAGAAGAAGTAGCTATAAAAATTATTCGTAATAATGACACTATGTACAAGGCCGGTATGGATGAGTTGGTCATACTAAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCGAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTGCGTGAGGTTTTAAAGAAATTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATATGCAAAACAACTTTTTATTGCACTGAAGCATCTTCGGAACTGCGGTGTTCTTCATTGTGATATAAAGCCAGACAATATGTTGGTGAATGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCTATGTTTGCTGGAAAGAATGAAGTTACACCATACCTTGTTAGCCGTTTTTATCGTGCCCCTGAAATAATACTTGGCTTGCCGTATGATCATCCGTTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAACTCTATACTGGAAAAGTTCTTTTCCCAGGTCCTAGTAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGCCCTTTTCCAAAGAAGATGCTTCGTAAGGGAGCTTTTATTGATCAGCATTTTGACCAGGACTTGAATTTTCTTGCTACAGAAGAGGATCCGGTGACGAAAAAGGCTATAAAGCGGTTGATTCTCAACATAAAGCCTAAAGATATTGGAACTATCATTGCTGGCTCTCCTGGAGAGGATCCTAAGATGCTAGCCAATTTCAAAGATCTTATGGACAAGGTTTTTGTCCTGGATCCTGAGAAGAGGTTGACAGTCTCACAAGCATTAAGCCACCCATTCATCACTGGCAAGTGA 3081 0.4362 MASDPHGSRRNKHRRSSSPEEVERSSKRHKHRHHGQRHHRHRHGSKKREEELEINAETVDKVPSPNLDLNSDPKIPRFDDVDDDVEEGEILEEDGEIGKKHAESDAESGEIMAAGDRGIRSDDSNPVHFTEEVLHRKDAIHSKETVGINAKASETNNEKISNGRFISPGLDGEYDTRHQRHTGSRKNGVDVCPTHSSAESLDGKHARASSDALGNGYLDGKSSKEDKWQHGELGCSKGNEKLKGDYDDEDLEVNGGKVTIHRKNSSPESGGGKYRTRESSPNYRCRSRSRSSGHTHKVVEEYAHSRRRYDDERIGEYGREREHVSRDLMTGDRRERSSSYYSREARDRGRSKDRDGDRDLRREKERERSRNREDERVHRRGKERERSHEKDRRDAEKDRSRGREVDRDRRIEKERDRDRSWDTVAERGRSDRGRERSRDRARIGERDRVWESERDDKYRERDKIRERERHKDRNTLDKDKYLGYEHGNDSRDRDIRSRHSRHEEAESHRERTRNSESVKVDNRMDRGEDEQDDLDETATLQFAEQEEEDLNRIKEESRRRREAILEKYKKQQPQQHQQAEETSESREKDKDPVNIPAPIPEAPDAKNDGVDVFEVEPSFTVDKSPRENGNDASEKIPGVARGLGEGTPKSERSDDKFCDDIFGETPTGVRKMGKGDGLRVDRGGLHDNWDDAEGYYSYRFGEILDGRYEVIAAHGRGVFSTVVRARNLKAGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGPSNNDMLRLHMELKGPFPKKMLRKGAFIDQHFDQDLNFLATEEDPVTKKAIKRLILNIKPKDIGTIIAGSPGEDPKMLANFKDLMDKVFVLDPEKRLTVSQALSHPFITGK 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0361 1026 Pfam Protein kinase domain 709 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0361 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 528 543 - -
Mibi12g0361 1026 ProSiteProfiles Protein kinase domain profile. 708 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 171 185 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 545 569 - -
Mibi12g0361 1026 Coils Coil 540 563 - -
Mibi12g0361 1026 FunFam Serine/threonine-protein kinase PRP4 homolog 768 1024 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 580 594 - -
Mibi12g0361 1026 PANTHER DUAL SPECIFICITY PROTEIN KINASE 407 1024 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 145 659 - -
Mibi12g0361 1026 FunFam serine/threonine-protein kinase PRP4 homolog 679 767 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 148 163 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 1 109 - -
Mibi12g0361 1026 SUPERFAMILY Protein kinase-like (PK-like) 695 1025 IPR011009 -
Mibi12g0361 1026 CDD STKc_PRP4 707 1023 IPR044092 GO:0004674|GO:0006468|GO:0045292
Mibi12g0361 1026 SMART serkin_6 708 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0361 1026 Gene3D Transferase(Phosphotransferase) domain 1 768 1024 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 220 257 - -
Mibi12g0361 1026 Gene3D Phosphorylase Kinase; domain 1 679 767 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 93 107 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 27 45 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 293 527 - -
Mibi12g0361 1026 MobiDBLite consensus disorder prediction 259 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0361 Mibi-ChrMibi12 7530766 7537777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0361 704 1025 MAP Kinase Gene Family AT2G18170 31.548 1.41e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mibi12g0361 Pkinase 6.9e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0361 12 7530766 7537777 Mibi12g0361 12 7530766 7537777 ECH