Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi12g0353 | ATGTGCCAGGGAGGCGACTTCTCCAGCGGTGATGGCACTGGTGGCGAATCAACCCACAAAGTCAATTTTGAGGACGAAAACTTCTACAAGAATCACACCGGTCCTGGAATACTTTCCATGGCTAATGCTGGACCAGGAACTAATGGATCCCAGTTCTATATCTAAAACTTCTGTGCTCTCTACACAGGAGAAAGGGGAGATGGGCCGGGCGGAAACCCACTTCACTACAAGGGCTCCTTCTTTCACTGTGTCATTCCGCAATTGATTTGCAAGGGAGGGGATTTCATCAGGGGAGATGGTGTCAGGGACAAGTCCATCTATGGCATCAATTTGGAAGATGAGAACTTCTTCAAAACTCACATTGGTCTTGGAATCCTCTCCATGGCTAATGATGGCCCTAGAACTAATGGATCTAAGTTCTGCATATGGACATCAAACATGGAATGGATACATGGCAACCACGTGGTTTTTGAACAACTCGTGGAAGGCATGTATGTGGTGAAGAGTATCGAAAAGGTTGGGTGTATCTATGGCAGAATTTCAGAGCCAGTGGTCATTAGTGACCACGATCAACTATAA | 579 | 0.4629 | MCQGGDFSSGDGTGGESTHKVNFEDENFYKNHTGPGILSMANAGPGTNGSQFYIXNFCALYTGERGDGPGGNPLHYKGSFFHCVIPQLICKGGDFIRGDGVRDKSIYGINLEDENFFKTHIGLGILSMANDGPRTNGSKFCIWTSNMEWIHGNHVVFEQLVEGMYVVKSIEKVGCIYGRISEPVVISDHDQL | 192 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi12g0353 | 192 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 139 | 151 | IPR002130 | GO:0000413|GO:0003755 | |
| Mibi12g0353 | 192 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 124 | 139 | IPR002130 | GO:0000413|GO:0003755 | |
| Mibi12g0353 | 192 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 152 | 167 | IPR002130 | GO:0000413|GO:0003755 | |
| Mibi12g0353 | 192 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 81 | 93 | IPR002130 | GO:0000413|GO:0003755 | |
| Mibi12g0353 | 192 | SUPERFAMILY | Cyclophilin-like | 55 | 192 | IPR029000 | - | |
| Mibi12g0353 | 192 | Gene3D | - | 55 | 192 | IPR029000 | - | |
| Mibi12g0353 | 192 | Gene3D | - | 1 | 54 | IPR029000 | - | |
| Mibi12g0353 | 192 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 54 | - | - | |
| Mibi12g0353 | 192 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Mibi12g0353 | 192 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 1 | 55 | IPR002130 | GO:0000413|GO:0003755 | |
| Mibi12g0353 | 192 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 56 | 187 | IPR002130 | GO:0000413|GO:0003755 | |
| Mibi12g0353 | 192 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 54 | 191 | IPR002130 | GO:0000413|GO:0003755 | |
| Mibi12g0353 | 192 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 53 | IPR002130 | GO:0000413|GO:0003755 | |
| Mibi12g0353 | 192 | SUPERFAMILY | Cyclophilin-like | 1 | 54 | IPR029000 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi12g0353 | Mibi-ChrMibi12 | 7419432 | 7423084 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi12g0353 | 1 | 54 | U-box Gene Family | AT5G67530 | 54.545 | 3.96e-10 | 56.6 |