Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0339 ATGAGCAGATATATCATTAACTACGCAAAAATGTGTGTGTTCCAACCATGCTTGTCCTGGTATCTTTCTGGTATAAACTTGCCATCTTTCACTCTTAGGGAAACCTTTAATGCTCCAAGATATCTTCAGTACATTTCATTGCTTTCCCTTGTGGGTCTTCAATTCCTTCTTTTCAGTTTATCTTGTCCTCTCTTCTTCTCAAACTCTTTTAAATTTCAACTTTGTTTGGTTTTGTTTAAATGTTTTTTTCTCAGGAGACCAGAAGAGAACCCATTAGACCTCAACAATTTGCCTGATGACTACCATAGAGATGGAAAACAAGTCCTTGAAGATATCTCCTCCTCAGGGTGCAGGAAAAAGAAAAGCGGCGGGAAGGAGGGAAAAGAAGAGTGTGGTAAGGTCTATGAGTGTAGGTTCTGTTCCCTCAAGTTCTGCAAATCTCAGGCCCTTGGTGGTCACATGAACCGCCACCGCCAAGAGAGGGAAACGGAGACTCTGAACCAAGCTCGTCAACTAGTATTCCGTAGTGATCATACCATAGCCGCCCAAGGGGCCCCTCACTTAGGGTGCTGCCAACCAGTGGTAGCAGGTGGAAGCTACGGAGGAGGAGGGGGCAACATGGGAGATCCGACGATGCCTGTAAGATTTCCGAGGTACTTGTCTGCTTCAACGACCACACACATATCTCCACCGCCTCCGCCACCGCCGTACATGTACCCGTCGCCGCCTCCTCCACCTCCACCGTCGTCGTCATCGTATTATGTGGGTCATGTTCTGCACAACTATGGGGGTGAGTCATCATCTTCAGCTGGTTACACATGTATTGGTGCACCAGTGGGTCAAGGGTTCGTTGGCAAGGACAGCACACTGCACAATCAGCAGGATGATGCTTTGAATTGGGGAAGGACCTATTCAGCGATCAATCGGTTTCATCAAGATGGCTTCTAA 948 0.4736 MSRYIINYAKMCVFQPCLSWYLSGINLPSFTLRETFNAPRYLQYISLLSLVGLQFLLFSLSCPLFFSNSFKFQLCLVLFKCFFLRRPEENPLDLNNLPDDYHRDGKQVLEDISSSGCRKKKSGGKEGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVFRSDHTIAAQGAPHLGCCQPVVAGGSYGGGGGNMGDPTMPVRFPRYLSASTTTHISPPPPPPPYMYPSPPPPPPPSSSSYYVGHVLHNYGGESSSSAGYTCIGAPVGQGFVGKDSTLHNQQDDALNWGRTYSAINRFHQDGF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0339 315 ProSiteProfiles Zinc finger C2H2 type domain profile. 135 162 IPR013087 -
Mibi12g0339 315 Gene3D Classic Zinc Finger 112 187 - -
Mibi12g0339 315 MobiDBLite consensus disorder prediction 223 249 - -
Mibi12g0339 315 SUPERFAMILY beta-beta-alpha zinc fingers 133 163 IPR036236 -
Mibi12g0339 315 PANTHER ZINC FINGER PROTEIN JAGGED 116 282 IPR045320 GO:0003700
Mibi12g0339 315 MobiDBLite consensus disorder prediction 227 249 - -
Mibi12g0339 315 ProSitePatterns Zinc finger C2H2 type domain signature. 137 157 IPR013087 -
Mibi12g0339 315 FunFam Zinc finger protein STAMENLESS 1 110 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0339 Mibi-ChrMibi12 7125561 7128294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0339 84 282 C2H2 Transcription Factor Family AT1G13400 42.654 3.98e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi12g0339 None None None