Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0330 ATGGAGAGAAAGTCGTCATCATCCAATATTCAAGAATTCATGGCTTTCTTCAACGATTCCTTATCGGATCAAAACCTTAATCTCCCCCTCCTCCACACCAACAATATTTATCCACAGCCTCTTCACTCATCAATCTCTCCTAATAATTATGTTCATGAAGATGCAGAAGCTATGCCTGTATCACAAACCTTTCTGGATTCTTCTGCTGACAAGAACAAGAGCCTGGTTATGAGCAAAAGGAAGAGAAACAGTAACAGACTTGAAGTTGAAGAGAAACCAAGAGACGTAATCCATGTTAGAGCCAAAAGAGGCCAAGCAACTGATAGCCACAGTTTAGCTGAAAGGGTGAGAAGAGAGAAAATCAACGAGAAGCTAAGATGTTTGCAGGAGTTAGTTCCAGGGTGCTACAAGACAATGGGTATGGCAGTAATGTTAGATGTGATCATAGATTATGTTCAATCACTGCAACAACAGATTGAGTTTCTTTCCATGAAGCTTACAGCAGCAACCATGCAATATGATTTCAACTCTTCTGAGTTCAATTTCTCTGAAACCATCCAGAGGAATAATATAAGTACTACTTGGCCAGTCCAAGAGATGGAGAAGATGGGAGGAGAAGGTTATTTCAATCCAACGTGGCCACTTCATTAA 651 0.404 MERKSSSSNIQEFMAFFNDSLSDQNLNLPLLHTNNIYPQPLHSSISPNNYVHEDAEAMPVSQTFLDSSADKNKSLVMSKRKRNSNRLEVEEKPRDVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQELVPGCYKTMGMAVMLDVIIDYVQSLQQQIEFLSMKLTAATMQYDFNSSEFNFSETIQRNNISTTWPVQEMEKMGGEGYFNPTWPLH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0330 216 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 105 155 IPR011598 GO:0046983
Mibi12g0330 216 SMART finulus 111 161 IPR011598 GO:0046983
Mibi12g0330 216 FunFam Transcription factor BEE 3 105 168 - -
Mibi12g0330 216 Pfam Helix-loop-helix DNA-binding domain 109 156 IPR011598 GO:0046983
Mibi12g0330 216 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 68 184 IPR024097 GO:0006355
Mibi12g0330 216 Gene3D - 101 176 IPR036638 GO:0046983
Mibi12g0330 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 103 174 IPR036638 GO:0046983
Mibi12g0330 216 CDD bHLH_AtBPE_like 95 180 - -
Mibi12g0330 216 Coils Coil 152 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0330 Mibi-ChrMibi12 6920403 6921874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0330 91 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 69.912 8.30e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g0330 HLH 2.3e-05 No_clan