Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0323 ATGGGTTCTAAGAAGGAAGGATCGTCTGCCCCAGCAATTCGACGAGATCCATATGAGGTTTTGTCTGTGTCGAAGGATGCAAATGATCAGGAGATAAAAACTGCTTACAGAAAGCTTGCCCTCAAGTATCACCCTGACAAAAATGCTGACAATCCTGAAGCCTCAGAACTTTTTAAAGAGGTTGCATTTTCGTACAGTATCTTGTCTGACCCAGAGAAGAAAAGGCAATATGACAGTGCTGGATTTGAGGCACTTGAAGCAGACAGCATGGACATGGAAGTTGACTTGTCCAATCTTGGAACTGTCAACACAATGTTTGCAGCTTTGTTCAGCAAGCTGGGTGTCCCTATCAAGACCACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGCACAGTTACAGTCAGACCCCTTCCAATTGGAACAGCAGTTAGTGGAAAGGTGGAGAAGCAAGGTGCTCATTTCTTTGGTGTGACAATAAATGAGCAGCAAGCTGAGTCAGGGGTTGTTATAAGAGTCACGTCAACTGCACAAAGCAAGTTCAAGTTGCTCTACTTTGAACATGATGCAAATGGTGGCTATGGCTTAGCATTGCAGGAAGACAGTGAAAAGACTGGCAAGGTGACTTCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGATTGGATTCAACTGTGAATGCTTTAGCAATGGCAAAGGATCCTGAAGCTGCCTTCTTCAAAAGGTTGGAAGGTCTTCAACCCTGTGAAGTCTCGGAACTAAAGCCTGGCACTCATATATTTGCAGTTTATGGAGATAACTTCTTTAAGACTGCCTCCTATACCATTGAGGCGCTTTGTACACAATCATATGAGGATACTACCGAGAAACTTAAGGACATTGAAGCTAAAATTTTATTAAAAAGGAATGAGCTACGCCAATTTGAAACAGAATATAGAAAGGCATTGGCACACTATCAAGAAGTGACTGAAAGATACACCAAAGAAAAGCAAACAGTAGATGAGTTTCTGAAGCAGAGAGATGGCATCCATTCTTGCTTCACTGTTTCCAGGACAATAATTTCTAGTGGTAATGGTAGTAATCTGAGTAATGGAAGTAGTAGCAAGAAATTTTCTGGTGAAGATTCCAAACAAGGGAGCCCTACGGAAGATGGAAGCACAGATGGCAAGGATAAATCTGGAAGAAAGAAATGGTTTAATCTCAATCTTAATGGTTCTGGTAAGAGAATGTTTTGA 1242 0.4138 MGSKKEGSSAPAIRRDPYEVLSVSKDANDQEIKTAYRKLALKYHPDKNADNPEASELFKEVAFSYSILSDPEKKRQYDSAGFEALEADSMDMEVDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTAVSGKVEKQGAHFFGVTINEQQAESGVVIRVTSTAQSKFKLLYFEHDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRLDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEALCTQSYEDTTEKLKDIEAKILLKRNELRQFETEYRKALAHYQEVTERYTKEKQTVDEFLKQRDGIHSCFTVSRTIISSGNGSNLSNGSSSKKFSGEDSKQGSPTEDGSTDGKDKSGRKKWFNLNLNGSGKRMF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0323 413 MobiDBLite consensus disorder prediction 360 385 - -
Mibi12g0323 413 Pfam DnaJ domain 16 78 IPR001623 -
Mibi12g0323 413 Gene3D DnaJ domain 2 99 IPR036869 -
Mibi12g0323 413 FunFam Chaperone protein dnaJ 16 1 98 - -
Mibi12g0323 413 PRINTS DnaJ domain signature 73 92 IPR001623 -
Mibi12g0323 413 PRINTS DnaJ domain signature 18 36 IPR001623 -
Mibi12g0323 413 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mibi12g0323 413 PRINTS DnaJ domain signature 36 51 IPR001623 -
Mibi12g0323 413 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Mibi12g0323 413 SMART dnaj_3 15 73 IPR001623 -
Mibi12g0323 413 MobiDBLite consensus disorder prediction 360 413 - -
Mibi12g0323 413 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Mibi12g0323 413 CDD DnaJ 16 70 IPR001623 -
Mibi12g0323 413 SUPERFAMILY Chaperone J-domain 15 86 IPR036869 -
Mibi12g0323 413 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 410 - -
Mibi12g0323 413 Coils Coil 286 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0323 Mibi-ChrMibi12 6786874 6792806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0323 7 88 C2H2 Transcription Factor Family AT1G74250 40.230 8.35e-12 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0323 12 6786874 6792806 Mibi12g0323 12 6786874 6792806 ECH