Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0322 ATGCCTGATGGAGCTCTGGCTATCGTAAATGGCGGCGCTATTGATTCCTCTTCCGAAACTTGCCTGAAGAACTCGCCGATTCTGATTTTCTCTTTCTTCCATAAAGCTATTCGCTCTGAGCTCGATTTCCTCCACCGTGCCGCCTTGGATTTTGCCACTAATCAACGAGCTTCTTCCTCTTATGATGTCAAACCCTTGTTCGACCGTTGTCACTTCCTTCATACCATCTATAAGCATCATTGTAATGCCGAGGATGAGGTCATATTTCCTGCATTAGATATACGTGTGAAGAATGTTGCGCGAACGTATTTCTTGGAGCATGAGGGAGAGGGTCTTCTTTTTGATCAATTGTTCAAGCTTCTCAATTCTAATTTGCTAGAGGAAGAGGGCTACCGTAGAGAATTAGCCTCTTGTACTGGTGCCCTTCGAACATCAATCAGCCAGCATATGTTTAAGGAAGAGGAGCAGGTCTTCCCCTTGGTTATTGAGAACTTTTCATTTAAAGAGCAGGCATCACTGGTGTGGCAATTTCTTTGCAGCTTACCAGTTAAAATGATGGAGGAGTTTCTTCCCTGGCTTGCTTTGTATGTATCATCTGATGAACATCAGGATATGCTTAAGTGCTTGTGCTCAATAATTCCAGAAGAGAAGCTTCTTCAACAGGTTGTTTTTGGATGGATGGAAGGGGTGAAGATTAAACATAGAAGTATAAATGATACCAAGGTTCATTGTGAGAATGTTGGAACACACGACTTAACCAATTGTTCTGAAAAGGCGTATTGTCTTTGTGAACCTTCCAAAAATGGAAAAAGGAAATGGATGGAGCTAAGCGTTGATCATACCAGTTCTTATTCATCATGCCCTATAGATGAAATATTACTTTGGCATAAGGCCATAAAACAAGAGTTGATTGATTTAACTGAGGCTGTTAGGAAGATACAACTTTCTGGAGAATTTTCTGATTTGTCTGCGTTTAATGGGAGGTTGCAGTTTATTACTGAGGTCTGCATCTTTCATAGCATTGCTGAGGACAAAGTTATATTCCCTGCGATAGATGCAGAGGTTTCTTTTCTTGATGAGCATGCTAATGAGGAACTTCAGTTTGACAAGCTTAGATCCCTGATGGAAGGAATTCAGAATGTTGAAGTCTGCTCATCATCTATTGAGGATTATATGAAGTTGAGGTCTCACACTGAACAAATAAAGGACAACCTACTGAAGCACTTTGACAATGAGGAAGCTCAGGTGTTACCGCTTGCACGAAAACATTTTAGCCCTCAAAGACAACGAGAATTACTTTATGAAAGTTTGCGCTTAATGCCTTTGAAATTGATCGAATCTGTAATACCGTGGCTGGTCGGATTTCTCAATGAAGAAGAAGCAAAGTTATTTCTACTGAATATGTATATGGCAGCCCCAACAGCAGATTATGCATTGATTACACTGTTTTCTGGTTGGGCATGCAAAAGAAAATCCAGGAACAACTGTTCCTTTTCAAGTAAAACAGGTTTGTGTTCTACAAGGAAACTATCAGAGATGGAAAACACTAGTCCATCATTCTGCATATGTGCACCTTCATTCAGTCCCGAGAAAGAATACCCATCCATTCGACCAGATGACGCACATGGAAGTAGTGAACCAGTCAAACCTGGAAAACTTGAACTGAGGGATAGGATTGATAATTCTTCCCTCACTGGAGCTAGAGAATCTTTTACCGTACCTGATAATCAGACTTGCTCTGTCCCTGGATTAGGGGTAAATGCAAATCATCTGGGAGCAAATTCATTAGTCCCCACAAAATCTCTGCGATCATTATCTAATGGTTCTGTGCCTCCACTTAACGCTAGTCTATTTGTCTGGGAAACAGATGTAGCCTCTGCTGGCGGCAGGTTCAAAACACGACCTATTGATAACATATTTAAATTTCATAAAGCCATTTGTAAAGACTTGGAGTATATAGATGTTGAATCTGGAAAATTGTTTGATTGTGATGAAAATTTCCTGAGGAGATTCACCGGTAGATTTCGCTTATTGTGGGGTTTGTACAGAGCTCATAGCAATGCAGAGGATGATATAGTATTTCCAGCATTAGAATCAAAAGAAACTCTTCAAAATGTTAGCCATTCCTACACTTTGGACCATAAGCAGGAAGAGAAACTGTTTGTAGATATTTCATTAGGACTCTCAGAGCTTACTCAATTACACGAATCCTTGAATAATAAGACTTCAGCTGACCATTTTACCAGCTCCTACTCTGATCATTCTGGTTGCTCTGATACCATTCAAAAGTATAATGAGCTAGTTACCAAGATTCAGGGCATGTGCAAATCTATCAGAGTAATGCTAGATCAACATATCTTCCGTGAGGAACTTGAATTATGGCCATTATTTGATGTTCATTTTTCTGTGGAAGAACAGGATAAGATTGTTGGTCGTATAATTGGTACTACTGGGGCAGAGGTTCTTCAATCAATGCTGCCATGGGTAACTTCTGCTCTCACACAGGAAGAGCAAAACAAAATGATGGACACATGGAAGCAGGCTACCAAAAACACCATGTTCAAAGAGTGGCTTAATGAATGGTGGGAAGGGCCCGCTTCAGTTTCAAACACAACTACACCTTGTGACCATCTTTCACTTGGTGCTGATGCCTTTGGCAATTTGGATCAGAGCTTTCAAGCTTTTAGGCCTGGGTGGAATGATATATTCAGGATGAACCAGAAAGAACTAGAATCCGAAATTAGAAAAGTTTCTCAAGATTCAACTCTTGATCCAAGAAGGAAATCCTATCTTATTCAAAATCTATTGACTAGTCGCTGGATAGCTTCTCAGCAGAAGTCATCTAAAGCAACAACAGATGAATTTGGAAATGGTGATGTACTGGAAAGATCACCTTCGTTTCATGATCCAGAGAAAAAAATCTTTGGTTGTGAGCATTACCGAAGAAATTGTAAACTTCTTGCAGCTTGCTGTGAGAAGTTATTCTCCTGCAGGTTTTGCCATGACAACGTCAGTGACCATTCCATGGATAGGAAGGCTACAACTGAGATGATGTGCATGCGCTGCCTGCAATTACAGCCAGTTGGACCAGTTTGTGTGACACCTTCTTGTGGTGGTCTGTCAATGGCAAAGTACTACTGTAGTATTTGCAAGTTTTTTGATGATGAAAGGAATGTTTACCATTGTCCTTTCTGCAATATATGCCGTCTGGGGAAAGGACTTGGTGTTGATTCCTTCCATTGCATGCAGTTACATCTGTTAGAGCTCTTCCTTGTGGCCATTTCATGCATTCCACTTGCTTTCAGGCATATACTTGTAGTCATTACACCTGTCCAATTTGCCGTAAATCTTTGGGAGATATGGCGGTTTATTTTGGCATGCTTGATGCTCTGTTGGCTTCCGAGGAACTCCCTGAAGAATATCAGAATCGTCGTCAGGATATACTATGTAATGATTGTGAGAAGAAGGGAACTGCACCATTCCATTGGCTATACCATAAGTGTGGGTTATGCGGGTCCTATAATACAAGGGTGA 3534 0.4078 MPDGALAIVNGGAIDSSSETCLKNSPILIFSFFHKAIRSELDFLHRAALDFATNQRASSSYDVKPLFDRCHFLHTIYKHHCNAEDEVIFPALDIRVKNVARTYFLEHEGEGLLFDQLFKLLNSNLLEEEGYRRELASCTGALRTSISQHMFKEEEQVFPLVIENFSFKEQASLVWQFLCSLPVKMMEEFLPWLALYVSSDEHQDMLKCLCSIIPEEKLLQQVVFGWMEGVKIKHRSINDTKVHCENVGTHDLTNCSEKAYCLCEPSKNGKRKWMELSVDHTSSYSSCPIDEILLWHKAIKQELIDLTEAVRKIQLSGEFSDLSAFNGRLQFITEVCIFHSIAEDKVIFPAIDAEVSFLDEHANEELQFDKLRSLMEGIQNVEVCSSSIEDYMKLRSHTEQIKDNLLKHFDNEEAQVLPLARKHFSPQRQRELLYESLRLMPLKLIESVIPWLVGFLNEEEAKLFLLNMYMAAPTADYALITLFSGWACKRKSRNNCSFSSKTGLCSTRKLSEMENTSPSFCICAPSFSPEKEYPSIRPDDAHGSSEPVKPGKLELRDRIDNSSLTGARESFTVPDNQTCSVPGLGVNANHLGANSLVPTKSLRSLSNGSVPPLNASLFVWETDVASAGGRFKTRPIDNIFKFHKAICKDLEYIDVESGKLFDCDENFLRRFTGRFRLLWGLYRAHSNAEDDIVFPALESKETLQNVSHSYTLDHKQEEKLFVDISLGLSELTQLHESLNNKTSADHFTSSYSDHSGCSDTIQKYNELVTKIQGMCKSIRVMLDQHIFREELELWPLFDVHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKNTMFKEWLNEWWEGPASVSNTTTPCDHLSLGADAFGNLDQSFQAFRPGWNDIFRMNQKELESEIRKVSQDSTLDPRRKSYLIQNLLTSRWIASQQKSSKATTDEFGNGDVLERSPSFHDPEKKIFGCEHYRRNCKLLAACCEKLFSCRFCHDNVSDHSMDRKATTEMMCMRCLQLQPVGPVCVTPSCGGLSMAKYYCSICKFFDDERNVYHCPFCNICRLGKGLGVDSFHCMQLHLLELFLVAISCIPLAFRHILVVITPVQFAVNLWEIWRFILACLMLCWLPRNSLKNIRIVVRIYYVMIVRRRELHHSIGYTISVGYAGPIIQG 1177
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0322 1177 Gene3D nmb1532 protein domain like 631 861 - -
Mibi12g0322 1177 CDD Hr-like 29 159 - -
Mibi12g0322 1177 Gene3D nmb1532 protein domain like 290 435 - -
Mibi12g0322 1177 Gene3D nmb1532 protein domain like 25 179 - -
Mibi12g0322 1177 FunFam Zinc finger protein BRUTUS 630 860 - -
Mibi12g0322 1177 CDD Hr-like 639 795 - -
Mibi12g0322 1177 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 678 1084 - -
Mibi12g0322 1177 Pfam Hemerythrin HHE cation binding domain 288 420 IPR012312 -
Mibi12g0322 1177 Pfam Hemerythrin HHE cation binding domain 34 161 IPR012312 -
Mibi12g0322 1177 Pfam Hemerythrin HHE cation binding domain 635 796 IPR012312 -
Mibi12g0322 1177 ProSiteProfiles Zinc finger CHY-type profile. 970 1039 IPR008913 GO:0008270
Mibi12g0322 1177 ProSiteProfiles Zinc finger CTCHY-type profile. 1042 1104 IPR017921 -
Mibi12g0322 1177 CDD Hr-like 290 418 - -
Mibi12g0322 1177 SUPERFAMILY CHY zinc finger-like 969 1033 IPR037274 GO:0008270
Mibi12g0322 1177 Pfam CHY zinc finger 977 1052 IPR008913 GO:0008270
Mibi12g0322 1177 SUPERFAMILY Zinc hairpin stack 1043 1083 IPR037275 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi12g0322 Mibi-ChrMibi12 6759134 6766969 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0322 25 1097 C2H2 Transcription Factor Family AT3G18290 57.827 0.0 1216