Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0320 ATGGCGGCATCCTTTCACAAAGCCACCCTCTTCTCCACACTCCTCCATCTTCTCCTCCTTCTCGTTCACAGCTCCCAAAATCCAGACTTTGAGGCTCTAATGGCCTTCAAAGCCTCCTCAGATCCCTCCAACAAGCTCTCATCTTGGAACTCCACCCCCAATCCCTGTTCTTCTTCTTGGTCCGGCGTCTTTTGCCTCCATAACAGAGTCTCTCGTCTCATCCTCGAAGACCTCAATCTCCAAAACTCCTACCAACCCTTAACTTCCTTAACCCATCTTCGAGTCCTCAGCCTCAAAAGAAACCATTTTTCCGGCCCCATTCCCATTCTCTCCAATTTCACTTCCCTGAAACTTTTGTATCTCTCTTACAATGAGTTTTCCGGCGACTTTCCGGCGACTGTCACTTCCCTTTTCCGCCTTTACCGTCTTGATCTCTCTCACAATAAACTTTCAGGTGAGATTCCTGCGACGATTAACCACATGACACACATTCTCACTCTCCGTTTAGATGAGAATAATTTCTCTGGTAACATTCCAAATCTGAACCTTCCTAGTCTTCAAGACTTCAATGTCTCCGGGAACAGATTCTCCGGTGAGATACCCAAATCGCTTTCTGGTTTTCCAGAATCGAGTTTCGCGTTAAACCCATCTCTGTGTGGAGCTCCGATTCGTAAATGTGCAAACTTTTTGGCTGTACCTAGCAAACCAAGATCTGAAGGAGCCATTGCTTCGCCATTAGCGCCAAGTAAGCCAAGATCACCGACTATATCATCCACACCCAGCTCAATGATGCCTTCAAACGAAGCAAAGCCTCAGAAAAAACCAAACTCGTCAACGAAAATAAGCCCAATTGCTCTAATTGGTATAATTCTTGGTGACATTGCGGTCCTTTCTGTGGTCACACTTCTTCTTTATTGCTATTTCTGGAGGAATTACGCGGCGAAATTGAAACAAGGGAAAGGTTCGAAGCTAATGGAGACTGAGAAAATCGTTTACTCATCGAGTCCGTACACAGTTCAATCGGGTTTTGAGAGGGGGAAGATGGTGTTTTTTGATGGGGTTAGGAAGTTTGAGCTTGAGGATTTGCTAAGAGCTTCGGCGGAAATGCTCGGAAAAGGCGGGTTCGGGACGGCTTACAAGGCGGTTTTGGATGATGGGAGTGTTGTTGCCGTTAAGAGGCTGAAGGATGCTCAGATTGGAGGGAAGAAAGAGTTTGAACAACACATGGAGATTCTGGGGAGGTTGAGGCATCCTAATGTTGTTCATTTGAGAGCTTATTATTTTGCCAGGGATGAGAAGTTGTTGGTGTCTGATTACATGCCTAATGGGAGCTTGTTCTGGCTTCTCCATGGTAACCGAGGACCTGGGCGGACCCCACTGGACTGGACCACAAGGCTTAAAATAGCAGCCACGGCGGCGCGTGGAGTAGCATTCATCCACAGTTCATGCAAATCCCTCAAACTCACACACGGCAACATTAAATCCACAAACATCCTCCTAGACAAGGACGGGAACGCGCGCGTGGCGGATTTCGGCCTCTCCGTCTTTGCGGGCCCCACCACCTCGAAATCCAACGGCTACCGTGCGCCGGAGGCATCCGACGGCCGTAAATCCACCCAAAAATCTGACGTGTTCTCCTTCGGTGTTGTCCTGCTGGAGATCCTCACCGGAAAGTGCCCCTCCGCCGTGGACGGCGGCGCCGGCACGGTGGTGGACCTTCCGAGGTGGGTACAGTCGGTGGTGAGGGAGGAATGGACGGCGGAGGTGTTTGATTTGGAGCTGATGAGGTATAAGGATATTGAGGATGACATGGTGGGGTTGCTTCAGATTGCTTTGGCTTGTACGGCTGCTGTGCCTGATCAACGGCCTAGCATGAGCCACGTGGTCAAGATGATCGAGGAGATTCGCGGCGTCGACGTGGCGCAGTCGTCCCATGACACGTTGGATTCTGCGTCTGATTCACCATCTGTGTCTGAAGATGCTTCTTGA 1989 0.4977 MAASFHKATLFSTLLHLLLLLVHSSQNPDFEALMAFKASSDPSNKLSSWNSTPNPCSSSWSGVFCLHNRVSRLILEDLNLQNSYQPLTSLTHLRVLSLKRNHFSGPIPILSNFTSLKLLYLSYNEFSGDFPATVTSLFRLYRLDLSHNKLSGEIPATINHMTHILTLRLDENNFSGNIPNLNLPSLQDFNVSGNRFSGEIPKSLSGFPESSFALNPSLCGAPIRKCANFLAVPSKPRSEGAIASPLAPSKPRSPTISSTPSSMMPSNEAKPQKKPNSSTKISPIALIGIILGDIAVLSVVTLLLYCYFWRNYAAKLKQGKGSKLMETEKIVYSSSPYTVQSGFERGKMVFFDGVRKFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAQIGGKKEFEQHMEILGRLRHPNVVHLRAYYFARDEKLLVSDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAATAARGVAFIHSSCKSLKLTHGNIKSTNILLDKDGNARVADFGLSVFAGPTTSKSNGYRAPEASDGRKSTQKSDVFSFGVVLLEILTGKCPSAVDGGAGTVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEDDMVGLLQIALACTAAVPDQRPSMSHVVKMIEEIRGVDVAQSSHDTLDSASDSPSVSEDAS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0320 662 MobiDBLite consensus disorder prediction 642 662 - -
Mibi12g0320 662 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 440 646 - -
Mibi12g0320 662 Pfam Protein kinase domain 368 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0320 662 Gene3D Phosphorylase Kinase; domain 1 338 439 - -
Mibi12g0320 662 SUPERFAMILY L domain-like 27 207 - -
Mibi12g0320 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 642 - -
Mibi12g0320 662 MobiDBLite consensus disorder prediction 240 278 - -
Mibi12g0320 662 FunFam Nuclear pore complex protein NUP107 26 180 - -
Mibi12g0320 662 FunFam pollen receptor-like kinase 1 335 439 - -
Mibi12g0320 662 Gene3D Ribonuclease Inhibitor 90 229 IPR032675 -
Mibi12g0320 662 Gene3D Ribonuclease Inhibitor 22 89 IPR032675 -
Mibi12g0320 662 CDD STKc_IRAK 370 635 - -
Mibi12g0320 662 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Mibi12g0320 662 Gene3D Transferase(Phosphotransferase) domain 1 440 654 - -
Mibi12g0320 662 ProSiteProfiles Protein kinase domain profile. 364 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0320 662 MobiDBLite consensus disorder prediction 250 278 - -
Mibi12g0320 662 SUPERFAMILY Protein kinase-like (PK-like) 368 633 IPR011009 -
Mibi12g0320 662 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Mibi12g0320 662 MobiDBLite consensus disorder prediction 643 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0320 Mibi-ChrMibi12 6735653 6739336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0320 29 660 Receptor kinase-like Gene Family AT1G68400 66.254 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi12g0320 Pkinase 1.2e-37 CL0016