Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0310 ATGATGGCTCTGGTTTTTGAGTTTTGTTTCCTCTTGATTTATCATATTTTGCTTGTTTCAGCAGGATATGGACATGCAAGCCATGATAAGTGTCCTAGATCCTTTGAGTGCGGAAAACTTGGAAGCATCGTGTTTCCTCTCACCAAGGTAGAAAGACCAGACTGTGGCTTAATAAAGGTTCATAATTGTGATGATCCAAATCCATCTTCAAATAAAGCGATTGAGCTAGACAAAGGTGGAAATCAATCCTGGCTGCTTACCAGCGTCTTACCACAGCTAAAGATGATTGGGGTTTTCCACCCAGATTTACACACTCGCTTACAATCTTGTGGTTCTTGTGAGGCCTTCAACAAGAATTTCAGTATTCCTGCAAAGTCACCTTTGATTTCTTTTGATATCAAATATAACATTTCACTCTTTAAATGTCACAACCACCTCAATGTCAGCCCCCCAACTGGTTTTATTAAAAATCACTGTGCTGGTTTTGATATCTATCATTACAGAGGAGACCTTAATCATCTAAAACCTGTCCAACAAAGATCTTTCTCAGCATGTTCAACTCTTGTTTTTCCCAAGAAAGACTGGCCTGATACCTCAGACCTTCAGTCGTTCTTATCAGCTGGAATGATGCTTGATATACGATTATCTGATGATTGTGACAAGTGTTACCACCACCTAAGAGGGCAATGTAAACTTGACAGCACCGATAAGTTTTACTGCGACAAAGGTCTATTTGGTGGGGTTTTAGGCACTTTGATAATTTTGCTGCGTCTCCGAAAGTATTACAAACGAAAGTATCCATCTCCAGACGTCCAATTGCAAATAACATGCAATAATACAAATGATCCGTACTTCAATGAAGATACAGAAAGTGGCAGAATCTACTTGGGGGTACCCCTCTTCTCTTATGAAGAGCTTAAGAAAGCAACAAATAACTTTGATCGTTCAAATGAATTGGGAAATGGAGGATTTGGCTCTGTTTACTATGGAAAACTCCAAGATGGACGTGAAGTCGCTGTTAAGCGCCTATATGACCACAATTGTCGACGAGTTGAACAATTCATGAACGAAATTGAGATACTAACTCGATTGCGCCATCGAAACCTTGTGTCTCTTTATGGCTGCACATCATGCCATACAGTTGATATAACCAGGTCTAGGGATGAGATAAATCTGGCAAATTTAGCTATAAATAAGATTCAAAAAAGTGCATTTGAGGAGTTGGTTGATCCTTGTCTTGGTTTTGAGTCAAATAATGAGGTGAGGAGGATGATAATCTCAGTGGCAGAGTTGGCTTTTCAGTGTTTACAGAGGGACAAGGATTTGAGACCTTCCATGGATGAGGTTTTGAAGATTTTAAGGAGAATCGAGGGTGGGAATGAGAAATTTGATGATCATGTTGAAGAAGTTGATGTTAATGGTGCTATTGATATATCACATAATGGTCCTATACATTTATCATCACCGCCTTCACCAGATTTATGA 1485 0.3933 MMALVFEFCFLLIYHILLVSAGYGHASHDKCPRSFECGKLGSIVFPLTKVERPDCGLIKVHNCDDPNPSSNKAIELDKGGNQSWLLTSVLPQLKMIGVFHPDLHTRLQSCGSCEAFNKNFSIPAKSPLISFDIKYNISLFKCHNHLNVSPPTGFIKNHCAGFDIYHYRGDLNHLKPVQQRSFSACSTLVFPKKDWPDTSDLQSFLSAGMMLDIRLSDDCDKCYHHLRGQCKLDSTDKFYCDKGLFGGVLGTLIILLRLRKYYKRKYPSPDVQLQITCNNTNDPYFNEDTESGRIYLGVPLFSYEELKKATNNFDRSNELGNGGFGSVYYGKLQDGREVAVKRLYDHNCRRVEQFMNEIEILTRLRHRNLVSLYGCTSCHTVDITRSRDEINLANLAINKIQKSAFEELVDPCLGFESNNEVRRMIISVAELAFQCLQRDKDLRPSMDEVLKILRRIEGGNEKFDDHVEEVDVNGAIDISHNGPIHLSSPPSPDL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0310 494 SUPERFAMILY Protein kinase-like (PK-like) 293 379 IPR011009 -
Mibi12g0310 494 Pfam Protein tyrosine and serine/threonine kinase 316 377 IPR001245 GO:0004672|GO:0006468
Mibi12g0310 494 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 379 IPR044652 GO:0004672
Mibi12g0310 494 ProSiteProfiles Protein kinase domain profile. 313 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0310 494 SMART tyrkin_6 313 453 IPR020635 GO:0004713|GO:0006468
Mibi12g0310 494 Gene3D Phosphorylase Kinase; domain 1 286 383 - -
Mibi12g0310 494 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0310 Mibi-ChrMibi12 6614094 6616926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0310 380 462 Receptor kinase-like Gene Family AT1G25390 51.807 6.12e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi12g0310 PK_Tyr_Ser-Thr 2.1e-10 CL0016