Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0308 ATGTCATATCAGATCACTTCAATTCACAGGTCAAACCTCGCGCCACCATTTCACCACCATGACCTCCCCAATCCCCAATCTTCTTCTTCTTCTTCTTCTTCGCCCTTCCCATCCTTCTCTCTCAAGATCCCCAGTTCCCAAATGAACCTATCCACCACCAATCTCTTCTTCCTCGTCTTCTCTGTTCTTATCGGAACCTCCCTCTGTGATGTAAACCCAAACTTCCTTGCTTGTGGGCCCCAAACATGTGGGAATGGCCAAAACATAAGCTACCCGTTCTACATCGAAGGCAAACAAGACCCCTCTTGTGGATTCCCTAAATTCGGCCTTGTTTGCGCTTCCAATGGCTCCCCAATGCTCAATCTCTCCAACACTCTCTACATCGTCAATGAAATCTCCTACCACAACCACTCCCTCCGAGTATCAAACCCCAATTTCCCAATCCCCAATTCCCCCAATTGTCTCTCCCCATCCCAAAACCTAACCATCGATTACAGGTTTCTCTTAGCTCCCAACCAGAAGGAGGTGGTTCTGTTCTTCGATTGCGAGCCACCACCGGAGGAGATGAAAGAGAACGTGTGGGGGTGTTATGAAGGGAACAGAAGCAGGTGGGTTCTGGGCATCGCGGTGGATGATGACATGAAGAAGATGAAGTATGCGAGGGATAATTGCAGGGGTGAGGCTATGAAGACAGTGGTGGAGCGTGTGGAAGGAGGAATAAGGGTGGCTTTGGGGAGAGGGTTCTTGTTGATGCCTGTGAATCGGACGGCGAGTGGGTGTGACACGTGCGAGAGAAGTGGAGGGAGGTGTGGCTTCGTCAATGCTGTAGATGCTTATGGCTTCAGATGCTTCTGCCCTGACAGCATCCATGTTGAGAAATGTCATCCTGGCAAAGGGGGTTCAGACAAACGCGCTTTGAAGCTGGGACTGGGATTAGGCTTAGGGATTGGAGTGCCATGGGTGATAGCAATGGGGATGATTGTGTGGTGGCGGTGGAGAAGGAAAAATGGAGATTCAGATGCAATAAACAAATATGGTGGTAATTCCAACATGGAGGGTAGCAATGTGTACTTTGGAATCCCTGTTTTCTCCTATTCTGAGCTCCAAGCAGCCACCAACGATTTTGACCCTTCCACCGAACTTGGTGATGGAGGCTTTGGCGCTGTTTACTATGGTAAACTTGAAGATGGACGTGAGGTGGCAGTAAAACGCCTATATGAGCAAAACTACAAACAAGTAGAACACTTCATGAATGAAGTGAGGATCGTCACTCGCTTACACCACAAAAACCTTGTCTCCCTCTATGGCTGCACCTCCCGCCATAGTCATGAGCTCCTCCTCGTCTATGAATTCATCCCAAATGGCACGGTTGCTTACCACCTCCACCTTCATAGAGATCCGAAAAAACCCACAGTCTTACCATGGTCCACTCGCATGAAAATCGCCATCCAAACAGCAAGAGCGTTGGTCTACCTCCATGCTTCTGATATCATTCACCGTGACATCAAAACCAACAACATTCTCCTCGACGAAGGCTTCAACGTCAAGGTTGCAGATTTCGGACTCTCAAGGTTGTTCCCCGGCGATGTTACTCATGTTTCCACGGCTCCTCAAGGGACACCGGGTTATCTCGACCCGGAATATCATCATAACTATCAGCTCACTAGCAAAAGTGATGTTTATAGTTTTGGAGTTGTGCTTATCGAGCTCATTACGTCGATGGCAGCTGTTGACATGAGCCGGGACTCAGACTCAATAAACTTATCAAGCCTAGCAGTGAGGAAGATTCAAAGAAGCGAGCTGAGCGAATTGGTGGATCCTTCTCTTGGATATGAAAGTGATGGGGTAGTGAAGATGATGGTGATTTTGGTGGCTCAATTGGCGTTTCAGTGTTTACAGACTAATAAGGATTTGAGACCCACTATGGAGGAAGTTTTGGAGAAATTGGAGAGGATTCAAAGGGGTAGTAGTGATCAGGTACATGAGACCCCACGATTGCCACCGGAATCACCAAATTGGGATGAGGTTGGCTTGTTGAAGAGCACAAATCCACCACCTCGTTCTCCTATTAGCGTTGCTGATAATTGGGTAAGCCAATCTACAACACCCAATGTCAGTGGTTAA 2124 0.4807 MSYQITSIHRSNLAPPFHHHDLPNPQSSSSSSSSPFPSFSLKIPSSQMNLSTTNLFFLVFSVLIGTSLCDVNPNFLACGPQTCGNGQNISYPFYIEGKQDPSCGFPKFGLVCASNGSPMLNLSNTLYIVNEISYHNHSLRVSNPNFPIPNSPNCLSPSQNLTIDYRFLLAPNQKEVVLFFDCEPPPEEMKENVWGCYEGNRSRWVLGIAVDDDMKKMKYARDNCRGEAMKTVVERVEGGIRVALGRGFLLMPVNRTASGCDTCERSGGRCGFVNAVDAYGFRCFCPDSIHVEKCHPGKGGSDKRALKLGLGLGLGIGVPWVIAMGMIVWWRWRRKNGDSDAINKYGGNSNMEGSNVYFGIPVFSYSELQAATNDFDPSTELGDGGFGAVYYGKLEDGREVAVKRLYEQNYKQVEHFMNEVRIVTRLHHKNLVSLYGCTSRHSHELLLVYEFIPNGTVAYHLHLHRDPKKPTVLPWSTRMKIAIQTARALVYLHASDIIHRDIKTNNILLDEGFNVKVADFGLSRLFPGDVTHVSTAPQGTPGYLDPEYHHNYQLTSKSDVYSFGVVLIELITSMAAVDMSRDSDSINLSSLAVRKIQRSELSELVDPSLGYESDGVVKMMVILVAQLAFQCLQTNKDLRPTMEEVLEKLERIQRGSSDQVHETPRLPPESPNWDEVGLLKSTNPPPRSPISVADNWVSQSTTPNVSG 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0308 707 CDD STKc_IRAK 381 652 - -
Mibi12g0308 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Mibi12g0308 707 MobiDBLite consensus disorder prediction 14 33 - -
Mibi12g0308 707 Pfam Wall-associated receptor kinase galacturonan-binding 78 142 IPR025287 GO:0030247
Mibi12g0308 707 Gene3D Phosphorylase Kinase; domain 1 349 451 - -
Mibi12g0308 707 ProSiteProfiles Protein kinase domain profile. 375 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0308 707 MobiDBLite consensus disorder prediction 684 707 - -
Mibi12g0308 707 SMART serkin_6 375 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0308 707 Pfam Wall-associated receptor kinase C-terminal 209 287 IPR032872 -
Mibi12g0308 707 Gene3D Transferase(Phosphotransferase) domain 1 452 662 - -
Mibi12g0308 707 MobiDBLite consensus disorder prediction 653 707 - -
Mibi12g0308 707 SUPERFAMILY Protein kinase-like (PK-like) 360 676 IPR011009 -
Mibi12g0308 707 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Mibi12g0308 707 FunFam Wall-associated receptor kinase-like 20 452 662 - -
Mibi12g0308 707 Pfam Protein tyrosine and serine/threonine kinase 379 649 IPR001245 GO:0004672|GO:0006468
Mibi12g0308 707 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 52 700 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0308 Mibi-ChrMibi12 6577832 6584016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0308 260 707 Receptor kinase-like Gene Family AT1G25390 55.240 3.88e-161 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi12g0308 PK_Tyr_Ser-Thr 2e-47 CL0016