Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0307 ATGAACACTACCACCCCGTTCATCATCTTCTTTGTTCTTCTAATCAGAACCACTTTCTGTGATGTGAACCCCAACCTCGAAGCTTGCGAGCCCAAAACATGTGGAAACGGCCCAATCATAACCTACCCATTCTATATTCAAGACAAACAACCCTCCTTCTGCGGATTCCCACGTTTCTCCCTCTTCTGTGCTCCCAATGGCTTCCCAATGTTCAACCTCTCCAACACCTTCTACATCGTCCAAGAAATCTTCTACGACAATCACTCCATCCGAGTCTCAAACCCTAATTTCTCAAATTCCCCCAATTGCCTTCCCCTTTCCCAAAACCTAACCCTAGATTTCCCCTTCTCCCTCGCCCCCAACCAGACACAGGTCCGATTGTTCTTCGATTGCGAATCGAATTCGCTGTTACCGGAGGAATTGAAGGAGAACGTGGTGGGGTGTTTTGAAGGGAATAAAAGTAGGTCGGTTTTGGGCATGGCGGTGGGAGATGAAGGAGAGAAGGAATTGATGTATGAGAGGGGTAATTGTAAGGGAGGGATGGTGACGACGACGGTGGAGAATTTGGAAGGAGGGATTAGGGTTGCTTTGGGAAGAGGGTTCTTGTTGAATACGGCGAATTTGACGGCGAGTGAGTGTGATGAATGTAAGAGAAGTGGAGGGAGGTGTGGATTTGTGATTCGTACTCAAGAGTTTGGATTCAGGTGCTTTTGCCCTGATCGTGATCATCTCCGAAAATGTCCACCTGGTGCACGTAAACGGGCTTTGAAGCTGGGACTGGGATTAGGTTTAGGAATTGGAGTGCCATGGATGATAACAATGGGGATACTTGTGTGGTGGTGGAGGTGCAGAAGAAAAAATGGAGATTCAGATGCAATTAACAGATATGGCGGTAATTCCAACATAGAGGGTAGTAATGTGTACTTTGGAATCCCTGTTTTCTCCTATTCTGAGCTCCAAGCAGCCACCAACGATTTTGACTCTTCCACTGAGCTTGGAGATGGAGGCTTTGGAGCTGTTTACTACGGTAAACTTGAAGATGGACGAGAAGTAGCAGTAAAACGTTTATACGAGCAAAACTACAAACAAGTAGAACACTTCATGAATGAAGTGAGGATCCTCACTCGCTTACACCACAAAAACCTTGTCTCCCTCTATGGTTGTACCTCCCGCCACAGCCGTGAGCTCCTTCTCGTCTATGAATTCATCCCAAATGGCACGGTTGCTCACCACCTCCACCTCCACAGAGATCCCAAAAAGGCCACTGTCTTACCATGGTCCACTCGCATGAAAATCGCCATCCAAACAGCAAGAGCATTGGTCTACCTCCATGCTTCTGAAATCATTCACCGCGACATCAAAACTAACAACATTCTCCTCGACGAAGGCTTCAACGTTAAGGTTGCAGATTTCGGACTCTCAAGGTTGTTCCCTGGCGATGTCACTCATGTTTCCACCGCTCCTCAAGGGACCCCGGGATATCTTGACCCCGAATATCATCATTGCTATCAACTCACTAGCAAAAGTGATGTTTATAGCTTTGGAGTTGTGCTTATTGAGCTCATTACATCGATGGCAGCTGTTGACATGAGTCGGGACTCAGAGTCGATAAACTTGTCAAGCTTAGCAGTGAGGAAAATACAGAGGAGTGAGCTGAGCGAATTGGTGGATCCTTCTCTTGGGTTTGAGAGTGATGAGGAAGTGAAGAGGATGGTGATTTTAGTGGCTCAACTGGCGTTTCATTGTTTACAAACTAACAAGGATTTCAGACCTACAATGGAGGAAGTTTTGGATACATTAGAGAGGATTCAAAGTGGGAGTAGTGATCAGTTACATGAGAATCCAAGATTGCCACCAGAATCAACCAATTGGGATGAGGTTGGCTTGTTGAAGAACACAAATCCACCACCTCATTCTCCTAATAGTGTTGCTGATAATTGGGTTAGCCAATCTACAACGCCTAATATCAGCAGTTAA 1977 0.4608 MNTTTPFIIFFVLLIRTTFCDVNPNLEACEPKTCGNGPIITYPFYIQDKQPSFCGFPRFSLFCAPNGFPMFNLSNTFYIVQEIFYDNHSIRVSNPNFSNSPNCLPLSQNLTLDFPFSLAPNQTQVRLFFDCESNSLLPEELKENVVGCFEGNKSRSVLGMAVGDEGEKELMYERGNCKGGMVTTTVENLEGGIRVALGRGFLLNTANLTASECDECKRSGGRCGFVIRTQEFGFRCFCPDRDHLRKCPPGARKRALKLGLGLGLGIGVPWMITMGILVWWWRCRRKNGDSDAINRYGGNSNIEGSNVYFGIPVFSYSELQAATNDFDSSTELGDGGFGAVYYGKLEDGREVAVKRLYEQNYKQVEHFMNEVRILTRLHHKNLVSLYGCTSRHSRELLLVYEFIPNGTVAHHLHLHRDPKKATVLPWSTRMKIAIQTARALVYLHASEIIHRDIKTNNILLDEGFNVKVADFGLSRLFPGDVTHVSTAPQGTPGYLDPEYHHCYQLTSKSDVYSFGVVLIELITSMAAVDMSRDSESINLSSLAVRKIQRSELSELVDPSLGFESDEEVKRMVILVAQLAFHCLQTNKDFRPTMEEVLDTLERIQSGSSDQLHENPRLPPESTNWDEVGLLKNTNPPPHSPNSVADNWVSQSTTPNISS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0307 658 SMART serkin_6 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0307 658 Pfam Wall-associated receptor kinase C-terminal 160 240 IPR032872 -
Mibi12g0307 658 Pfam Protein tyrosine and serine/threonine kinase 329 600 IPR001245 GO:0004672|GO:0006468
Mibi12g0307 658 MobiDBLite consensus disorder prediction 605 658 - -
Mibi12g0307 658 ProSiteProfiles Protein kinase domain profile. 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0307 658 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Mibi12g0307 658 Gene3D Phosphorylase Kinase; domain 1 301 402 - -
Mibi12g0307 658 Gene3D Transferase(Phosphotransferase) domain 1 403 617 - -
Mibi12g0307 658 SUPERFAMILY Protein kinase-like (PK-like) 311 626 IPR011009 -
Mibi12g0307 658 MobiDBLite consensus disorder prediction 626 658 - -
Mibi12g0307 658 Pfam Wall-associated receptor kinase galacturonan-binding 29 93 IPR025287 GO:0030247
Mibi12g0307 658 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 2 651 IPR044652 GO:0004672
Mibi12g0307 658 CDD STKc_IRAK 332 603 - -
Mibi12g0307 658 FunFam Wall-associated receptor kinase-like 20 403 613 - -
Mibi12g0307 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0307 Mibi-ChrMibi12 6546157 6554933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0307 28 658 Receptor kinase-like Gene Family AT1G25390 45.086 7.35e-162 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi12g0307 PK_Tyr_Ser-Thr 4.5e-48 CL0016