Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0305 ATGAGCGCTTCTAGACATGAATTCACAGGTCAAACCTCCGCCACCATTGCCATTACCATTACCATTACCATTACCGATAACCATGATCTCCAATCCTCTTTCACACTCCCTTCTTTCTCCTTCTTCTCTCTCAACCAGATGACCCCTTGCTTCATCCTCCTCGTCTTCTCTGTTCTAATAAAATCCACCCACTGTGATGTGAATCCAAGCTTCCAAGCTTGTGAGCCCCAAAGCTGTGGGAACGGCCCAACCATAAGCTACCCCTTCCATATCAAAGGTAAACAAGACCGCCTCTGTGGATTCCCTGGTTTCAACCTCCTTTGTGCTTCCAATGGCTTCCCTATGCTCAATCTCTCCGGCACTCTCTACATCGTCAACCAAATTTCCTACCCCAACCACAACCTCTCCCTTCGAGTATCAAACCCCAATTTCCCAATCCCCAATAATTCCCCCACTTGTCTCTCCCTATCCCAAAACCTCACCATCGATTACAGGTTTCGCTTAGCTCCCAACCAGAAGCAGGTGGTTCTGTTCTTCGACTGCGAGTCACCACCGGAGGGGATGAAAGAGAACGTGTGGGGGTGCTATGAGGGGAACAGGACGAGGTGGGTTTTGGGCATGGAGGTGGATGATGATGTGAAGAAGATGAAGTATGCGAGGGATAATTGCAGGGGTGGGACTATGAAGACAGTGGTGGAGAGTATGGAAGGAGGGATTAGAGAGGCTTTGGGGAGAGGGTTCTTGTTGAAGCCCAGGAATTGGACGGCCAGTGAGTGTGATGAATGCCTCAGCAGTGGAGGCAGGTGTGGCTTCCTCTATGTTGCAGATGTCTTTGGCTTCAGATGCATCTGCCGCGATCGCAACTATCTTCAGACTTGCCATTCTGGTCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTCTATATATATATATGTGTGACTTCCTGCACTACCATTTCTTTGTCTCAATGCTTATTGCTGCATTACAAGTGTTGTTACTTAGATTACATACATTGTTAAAAAACAAACTTGGTTTAGGGATTGGAGTGCCATGGGTGATAACAATGGGGATGATTGTGTGGTGGAGGTGGAGAAGGAAAAATGGAGATTCAGATGCAATAAACAAATATGGTGGTAATTCCAACATGGAGGGTAGCAATGTGTACTTTGGAATCCCTGTTTTCTCCTATTCTGAGCTCCAAGCAGCCACCAACGATTTTGACCCTTCCACTGAACTTGGAGATGGGGGCTTTGGCGCTGTTTACTACGGTAAACTTGAAGATGGACGTGAAGTGGCAGTGAAACGCCTATATGAACAAAACTACAAACAAGTAGAACACTTCATGAATGAAGTGAGGATCCTTACTCGCTTACACCACAAAAACCTTGTCTCCCTCTATGGTTGCACCTCTCGCCATAGTCGTGAGCTCCTCCTTGTCTATGAATTCATACCAAATGGCACACTCATTACATCGATGGCGGCTGTTGACATGAGTCGCGACTCAGAGTCGATAAACTTGTCAAGCTTAGCAGTGAGGAAAATACAAAGGAGCGAACTGAGCGAATTGGTGGATCCTTCTCTTGGGTTTGAGAGTGATGGGGAAGTAAAGAGGATGGTTATTTTAGTGGCTCAATTGGCGTTTCAGTGTTTACAGACTAACAAGGATTTCAGACCTACCATGCAGGAAGTTTTGGATACATTAGAGAGGATTAAAAGTGGGAGTAGTGATCAGTTACATGAGAATCCAAGATTGCCACCAGAATCAACCAATTGGGATGAGGTTGGCTTGTTGAAGAACACAAATCCACCACCTCATTCTCCTAATAGTGTTGCTGATAATTGGGTGAGCCAATCTACAACGCCTAATGTTAGCAGTTAA 1878 0.4633 MSASRHEFTGQTSATIAITITITITDNHDLQSSFTLPSFSFFSLNQMTPCFILLVFSVLIKSTHCDVNPSFQACEPQSCGNGPTISYPFHIKGKQDRLCGFPGFNLLCASNGFPMLNLSGTLYIVNQISYPNHNLSLRVSNPNFPIPNNSPTCLSLSQNLTIDYRFRLAPNQKQVVLFFDCESPPEGMKENVWGCYEGNRTRWVLGMEVDDDVKKMKYARDNCRGGTMKTVVESMEGGIREALGRGFLLKPRNWTASECDECLSSGGRCGFLYVADVFGFRCICRDRNYLQTCHSGLPPSLPPSLSLYIYMCDFLHYHFFVSMLIAALQVLLLRLHTLLKNKLGLGIGVPWVITMGMIVWWRWRRKNGDSDAINKYGGNSNMEGSNVYFGIPVFSYSELQAATNDFDPSTELGDGGFGAVYYGKLEDGREVAVKRLYEQNYKQVEHFMNEVRILTRLHHKNLVSLYGCTSRHSRELLLVYEFIPNGTLITSMAAVDMSRDSESINLSSLAVRKIQRSELSELVDPSLGFESDGEVKRMVILVAQLAFQCLQTNKDFRPTMQEVLDTLERIKSGSSDQLHENPRLPPESTNWDEVGLLKNTNPPPHSPNSVADNWVSQSTTPNVSS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0305 625 Pfam Wall-associated receptor kinase galacturonan-binding 74 137 IPR025287 GO:0030247
Mibi12g0305 625 Pfam Protein tyrosine and serine/threonine kinase 410 495 IPR001245 GO:0004672|GO:0006468
Mibi12g0305 625 ProSiteProfiles Protein kinase domain profile. 406 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0305 625 MobiDBLite consensus disorder prediction 572 625 - -
Mibi12g0305 625 Pfam Wall-associated receptor kinase C-terminal 221 286 IPR032872 -
Mibi12g0305 625 Gene3D Phosphorylase Kinase; domain 1 380 482 - -
Mibi12g0305 625 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Mibi12g0305 625 Gene3D Transferase(Phosphotransferase) domain 1 486 580 - -
Mibi12g0305 625 SUPERFAMILY Protein kinase-like (PK-like) 386 494 IPR011009 -
Mibi12g0305 625 MobiDBLite consensus disorder prediction 593 625 - -
Mibi12g0305 625 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 50 488 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0305 Mibi-ChrMibi12 6511742 6517686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0305 488 625 Receptor kinase-like Gene Family AT1G25390 45.455 3.71e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi12g0305 PK_Tyr_Ser-Thr 1.3e-15 CL0016