Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0290 ATGGGATTGCATAACCAGCTAAACGACGTCGCTTCAGATTCAATCCCTCTCCTCTTCTTGGCTCTCCTCGCCGATTGCCTCAACCACCTTCGTTCCTCCCTCATCGCTCTCTTCCAATCCTTCGGAATCTCCAGATTCGATTCCGATAACGCCGTCGCCGCCGCCGCCGCCGTCGACGACGGCTTCCTCTCCGCCGTCGGATCCGGCCTCGCCAGCCTAATCGTCCTCTCCGAGCAGTTAAATCTCAACCGCCGCTTCTCCTTCCGATACTCCGCCGTCTCCGGCGGCGATATTGGATCTCCGAGGTGTGTGGTTTGTCAGAGTGCCTTTGAAGACGGCGACCTTGTTCGTAAGCTTCCTTGCCGCCATGTCTTTCATAGGTTCTGCTTCGATGGTTGGCTTGACCACCTCAATTTTAACTGCCCTCTCTGTCGATCTCCGGTGGTTTCCGATGAGCGCGTGGCGATTGCTGAGCGGCGCGTGTCGCCGGAGATTGTTTCTTGGTTCTCTATGCGGTAA 519 0.5665 MGLHNQLNDVASDSIPLLFLALLADCLNHLRSSLIALFQSFGISRFDSDNAVAAAAAVDDGFLSAVGSGLASLIVLSEQLNLNRRFSFRYSAVSGGDIGSPRCVVCQSAFEDGDLVRKLPCRHVFHRFCFDGWLDHLNFNCPLCRSPVVSDERVAIAERRVSPEIVSWFSMR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0290 172 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Mibi12g0290 172 SUPERFAMILY RING/U-box 96 151 - -
Mibi12g0290 172 SMART ring_2 103 144 IPR001841 -
Mibi12g0290 172 Pfam Ring finger domain 102 145 IPR001841 -
Mibi12g0290 172 CDD mRING-H2-C3H2C2D_ZSWM2 103 145 - -
Mibi12g0290 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 155 IPR013083 -
Mibi12g0290 172 PANTHER RING ZINC FINGER PROTEIN-RELATED 52 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0290 Mibi-ChrMibi12 6288637 6289155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0290 1 171 C3H Transcription Factor Family AT1G15100 46.784 1.73e-43 140