Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0258 ATGGTGGATTTTGGCGGGAAAAAGTTGCGCCAAGTTGTTTCAGGCTTCGGAGGTAACGGTCTCGGCCAGGTCCTCGCTGCTGTGGCAGTTACTCTTCTTGTTCGCCTTTTCTCTGGTCCAGGTCCTGTAATTCTTCCAGAAAACGAGAATGAAGACTATGGTGACGGTGAAATTGATGATGTTGATGACGAAGGTGAGAGTGAAGGTCCTGTTTCCGGTAAAGTTTTTCCGGTTACAATCCGGTGGAGTAATATCACTTGCTCTCTTTCTGATAAATCCTCCAAGTCTGTGAGGTTTTTGCTGAAAAATGTGAGTGGAGAAGCGAAGCCTGGAAGGTTGTTAGCTATTATGGGCCCTTCGGGTTCTGGAAAAACTACATTGCTTAATGTTCTTGCGGGTCAGTTAGCAGCATCTCCCAGGCTGAATCTGTCAGGCCTCTTGGAGTTCAATGGCAAGCCTAGTTCAAAGACAAATTATAAGTTTGCTTATGTGAGACAGGAGGATCTGTTTTTCTCACAGCTCACAGTGCGAGAGACTTTGTCTCTTGCTACTGAACTCCAGCTGCCTTGCATATCTTCTGTGGAAGAGAGGGATGAATATGTGAAAAACCTATTGTTCAAACTAGGATTGGTCAGTTGTGCTGATACCATTGTTGGTGATGCAAAAGTTCGAGGAATTAGTGGTGGTGAAAAGAAACGCCTATCTTTGGCGTGTGAGCTTCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCAACTACTGGACTTGATGCCTTTCAGGCTGAGAAAGTGGTGGAAACTCTCCAACAACTTGCACAAGATGGTCATACAGTAATTTGCTCTATTCATCAGCCAAGAGGTTCAGTGTATAATAAATTCGATGACATTGTCTTGCTGACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGGACCATTGGCATACTTCTCAAAATTTGGGTACCCGTGCCCTGATCATGTCAATCCTGCTGAATTTTTGGCTGATCTAATATCCATTGACTACAGTTCTGCTGAAAGTGTTTATTCCTCTCAAAAGAGAATTGACAGTCTTGTTGAGGCATTCTCTGATAGACTTTCTACAATAATATATGCAACTCCAATTACCAAAGAGGTGCTTTACAAAAATGGAAAGAGAATTGGGATGAGAACTGTAGCTAAGAAGAAAGGAGGTTGGTGGAAGCAGTTCTGGTTGCTCCTCAGGCGAGCATGGATGCAGGCTTCCCGTGATGGACCCACAAACAAAGTTCGAGCAAGGATGTCCATCGCATCAGCAGTTATTTTTGGTTCAGTTTTCTGGAGAATGGGGAGATCTCAAACTTCTATACAAGATAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCTATGGCTGCTCTTACAAAGACTGTCGGGGTCTTTCCAAAGGAGCGTGCTATTGTAGATAGAGAACGTGCAAAAGGCTCCTATTCATTGGGTCCTTATCTGTTTTCAAAATTGCTGGCTGAGATTCCTATCGGAGCAGCTTTTCCACTGATGTTTGGTGCTGTTTTGTACCCTATGGCGCGCCTTCATCCTACTTTACTGAGATTTGGGAAATTCTGTGGAATAGTCACTGTAGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGAGCTATGGTTCCAACCACTGAAGCAGCCATGGCAGTTGGCCCCTCTCTTATGACTGTTTTTATTGTATTTGGAGGCTATTATGTCAATCCTGAAAATACTCCAATCATCTTCCGCTGGATTCCTCGCGTTTCTCTCATTAGATGGGCCTTTCAGGGACTCTGCATCAATGAATTTAGTGGTCTTCAATTTGAACATCAGAATCCATTTGATGTTCAAACAGGAGAACAGGCACTGGAGCGCATATCTTTTGGAGAAAGCAAAATTAGGGATACAGTGGTGGCACAAAGTAAGATACTGTTATTTTGGTACTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCAAAGTACCAGCGACTTGAGCCACCCGCACTTGATCACGACAAGTCGCATTCAAAACTTGAGGAGCTTAATCCCGAACATGACGATCAGTCACCAATTGAAAATCAACCAGTGAATCAGGTTGATTCAAATCAAGCTGATCCTGTTGGACCTTTCATCCTAGAAGGTGCTGAGTAA 2184 0.4386 MVDFGGKKLRQVVSGFGGNGLGQVLAAVAVTLLVRLFSGPGPVILPENENEDYGDGEIDDVDDEGESEGPVSGKVFPVTIRWSNITCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLNLSGLLEFNGKPSSKTNYKFAYVRQEDLFFSQLTVRETLSLATELQLPCISSVEERDEYVKNLLFKLGLVSCADTIVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTVICSIHQPRGSVYNKFDDIVLLTEGSLVYAGPARDGPLAYFSKFGYPCPDHVNPAEFLADLISIDYSSAESVYSSQKRIDSLVEAFSDRLSTIIYATPITKEVLYKNGKRIGMRTVAKKKGGWWKQFWLLLRRAWMQASRDGPTNKVRARMSIASAVIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTLLRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPRVSLIRWAFQGLCINEFSGLQFEHQNPFDVQTGEQALERISFGESKIRDTVVAQSKILLFWYCTTYLLLEKNKPKYQRLEPPALDHDKSHSKLEELNPEHDDQSPIENQPVNQVDSNQADPVGPFILEGAE 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0258 727 Pfam ABC-2 type transporter 403 613 IPR013525 GO:0016020|GO:0140359
Mibi12g0258 727 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 80 326 IPR003439 GO:0005524
Mibi12g0258 727 MobiDBLite consensus disorder prediction 699 715 - -
Mibi12g0258 727 FunFam ABC transporter G family member 7 78 316 - -
Mibi12g0258 727 MobiDBLite consensus disorder prediction 675 698 - -
Mibi12g0258 727 CDD ABCG_EPDR 77 308 - -
Mibi12g0258 727 Pfam ABC-2 type transporter 283 340 IPR043926 GO:0140359
Mibi12g0258 727 MobiDBLite consensus disorder prediction 675 727 - -
Mibi12g0258 727 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 69 632 - -
Mibi12g0258 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 311 IPR027417 -
Mibi12g0258 727 SMART AAA_5 110 303 IPR003593 -
Mibi12g0258 727 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Mibi12g0258 727 Gene3D - 77 313 IPR027417 -
Mibi12g0258 727 MobiDBLite consensus disorder prediction 46 70 - -
Mibi12g0258 727 Pfam ABC transporter 101 253 IPR003439 GO:0005524
Mibi12g0258 727 MobiDBLite consensus disorder prediction 50 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0258 Mibi-ChrMibi12 5834746 5840521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0258 100 308 Calmodulin-binding Proteins AT2G36910 28.440 4.14e-11 64.7